{"id":"W4389030062","doi":"10.1093/ofid/ofad500.1809","title":"2187. Earliest Description of Mobile Genetic Elements (MGEs) Involved in Establishing <i>bla</i>NDM Persistence Following its Spread From <i>Acinetobacter</i> spp. to Enterobacterales","year":2023,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Sherbrooke","funders":"Institute of Circulatory and Respiratory Health; OPEC Fund for International Development","keywords":"Mobile genetic elements; Minion; Plasmid; Biology; Genetics; Whole genome sequencing; Klebsiella pneumoniae; Insertion sequence; Transposition (logic); Bacteria; Genome; Nanopore sequencing; Gene; Microbiology; Transposable element; Escherichia coli; Computer science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000089524,0.0003167813,0.0002513301,0.001003139,0.0004130865,0.000493652,0.0002523022,0.0003541854,0.002370257],"category_scores_gemma":[0.0003499365,0.0001828411,0.0004430191,0.00112269,0.0001894894,0.000201553,0.0003612419,0.000270448,0.00140382],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003173103,"about_ca_system_score_gemma":0.0003252274,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00260004,"about_ca_topic_score_gemma":0.00326364,"domain_scores_codex":[0.9998537,0.00001138292,0.00001569907,0.00004558947,0.00003816852,0.00003544577],"domain_scores_gemma":[0.9997252,0.00004447151,0.00007788287,0.00003602729,0.00006701858,0.00004943771],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0008971029,0.0001661746,0.1496894,0.0006937177,0.0000710519,0.001960153,0.001083494,0.000626191,0.7788776,0.001144324,0.0009280372,0.06386277],"study_design_scores_gemma":[0.00003030245,0.0006959568,0.655909,0.0001760341,0.0001593144,0.005807109,0.001147147,0.002210051,0.2851785,0.0006216802,0.04798586,0.00007900401],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9839894,0.000586908,0.004334473,0.00006295062,0.00002398429,0.00005960387,0.003973299,0.0002271685,0.006742152],"genre_scores_gemma":[0.9754218,0.0003902282,0.009183408,0.00005607971,0.00001949381,0.00005287771,0.009942011,0.00010496,0.004829122],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00260004,"threshold_uncertainty_score":0.007929325,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01784610544327157,"score_gpt":0.2596320425984114,"score_spread":0.2417859371551398,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}