{"id":"W4389074075","doi":"10.1097/qad.0000000000003799","title":"Primary HIV infection features colonic damage and neutrophil inflammation yet containment of microbial translocation","year":2023,"lang":"en","type":"article","venue":"AIDS","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Indigenous and Northern Affairs Canada; Ministero della Salute","keywords":"Biology; Immunology; Chromosomal translocation; Immune system; Inflammation; Gut flora; Myeloperoxidase; Microbiology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009295331,0.0002750952,0.0002224183,0.0002434512,0.0003460351,0.0003472266,0.0001090657,0.0003310494,0.003462848],"category_scores_gemma":[0.0002515005,0.0001472376,0.0001094162,0.0002157876,0.0002428804,0.0001719164,0.0002214039,0.0002428257,0.0003600797],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001378906,"about_ca_system_score_gemma":0.0001456848,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007055239,"about_ca_topic_score_gemma":0.001183895,"domain_scores_codex":[0.9999129,0.00001029941,0.000007182747,0.00002694955,0.00001690319,0.00002576282],"domain_scores_gemma":[0.9998296,0.00002395244,0.00006272474,0.00001332261,0.00001929832,0.00005101791],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0018305,0.0002014487,0.7627311,0.0004202373,0.00008735935,0.009041185,0.0004169325,0.00007082231,0.2070896,0.0001007345,0.0003293184,0.01768076],"study_design_scores_gemma":[0.00001899339,0.0007711482,0.9671708,0.00003123457,0.00002808353,0.02410897,0.000255626,0.00008690406,0.006882651,0.00007045334,0.0005702436,0.000004885033],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9982071,0.0007374056,0.0001271853,0.00001748182,0.000004485161,0.00001423051,0.0001192209,0.000007948663,0.0007648896],"genre_scores_gemma":[0.999202,0.0002011078,0.0001603639,0.00002424978,0.000008636644,0.000006234294,0.0001175532,0.000001114627,0.0002787099],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003462848,"threshold_uncertainty_score":0.0115844,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005497723543222876,"score_gpt":0.2337015982416519,"score_spread":0.228203874698429,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}