{"id":"W4389086573","doi":"10.1038/s41467-023-43585-5","title":"Structural and functional insights into the delivery of a bacterial Rhs pore-forming toxin to the membrane","year":2023,"lang":"en","type":"article","venue":"Nature Communications","topic":"Yersinia bacterium, plague, ectoparasites research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Agencia Estatal de Investigación; Medical Research Council; Universitat Jaume I; European Regional Development Fund; European Commission; Euskal Herriko Unibertsitatea; Generalitat Valenciana; Eusko Jaurlaritza; Functional Genomics Center Zurich; Ministerio de Ciencia e Innovación; Diamond Light Source; Canadian Institutes of Health Research; Eidgenössische Technische Hochschule Zürich; Wellcome Trust","keywords":"Microbial toxins; Toxin; Chemistry; Membrane; Pore-forming toxin; Biophysics; Microbiology; Biology; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002076089,0.00008614305,0.00008207549,0.00006255165,0.0003725099,0.00003415438,0.000685204,0.0001503141,0.00001491931],"category_scores_gemma":[0.0002191461,0.00005365337,0.00004373243,0.0003116986,0.0001784887,0.000007672948,0.0008209394,0.0003366481,0.000008258797],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001323653,"about_ca_system_score_gemma":0.000079082,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004269481,"about_ca_topic_score_gemma":0.001584537,"domain_scores_codex":[0.9992938,0.0001366004,0.0001419205,0.0001483597,0.0001465746,0.0001327699],"domain_scores_gemma":[0.9985757,0.0001561384,0.00004789147,0.001019319,0.000155902,0.00004507362],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001007625,0.00001093758,0.001103134,0.000007585983,0.00005509103,3.918659e-7,0.0009933355,0.00003124708,0.9918254,0.0006052452,0.003672988,0.001593901],"study_design_scores_gemma":[0.0007641641,0.0002241273,0.2746092,0.00003221352,0.00004883842,0.00004342964,0.001263681,0.001350782,0.2211257,0.0001999652,0.500012,0.0003259073],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928644,0.001689059,0.000006047043,0.004773694,0.0001394363,0.0002252972,0.00002517468,0.00001074407,0.0002661966],"genre_scores_gemma":[0.9978535,0.0005771369,0.0003166774,0.0002703112,0.0001261206,0.00003222325,0.00065617,0.00001021117,0.000157703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7706997,"threshold_uncertainty_score":0.2865083,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0204050951670307,"score_gpt":0.298245651617656,"score_spread":0.2778405564506253,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}