{"id":"W4389135561","doi":"10.21203/rs.3.rs-3650554/v1","title":"Bradyrhizobium ontarionense sp. nov. isolated from Aeschynomene indica (Indian jointvetch) harbours photosynthesis, nitrogen fixation and nitrous oxide reductase genes.","year":2023,"lang":"en","type":"preprint","venue":"Research Square","topic":"Legume Nitrogen Fixing Symbiosis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Bradyrhizobium; Rhizobia; Nitrogen fixation; Botany; Whole genome sequencing; Genome; Diazotroph; Gene; Lineage (genetic); Phylogenetic tree; Genetics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00006545752,0.0004452379,0.0001874663,0.0003405973,0.0002903338,0.0002596581,0.0001514609,0.0001685473,0.0007961565],"category_scores_gemma":[0.0001525654,0.0001017882,0.0002133698,0.0007017516,0.00008841583,0.0001867416,0.000264084,0.0002999027,0.0005086761],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002150786,"about_ca_system_score_gemma":0.0004298425,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008438697,"about_ca_topic_score_gemma":0.01390877,"domain_scores_codex":[0.999894,0.000005196132,0.00001342694,0.00003984676,0.00003114262,0.00001638039],"domain_scores_gemma":[0.9998789,0.00001397174,0.00003750872,0.00001144435,0.00003373743,0.00002443876],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001449468,0.00005569213,0.01232808,0.000111772,0.00001630138,0.0001856073,0.00007326152,0.00006208901,0.9815769,0.0000491741,0.0001208646,0.00527541],"study_design_scores_gemma":[0.00003916703,0.000609056,0.7391226,0.00004532778,0.0001876439,0.002307785,0.0008025191,0.0007523182,0.2440547,0.00009966393,0.0119547,0.00002452748],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9905345,0.0004570411,0.001186079,0.00005183378,0.00003365325,0.0000698084,0.005601136,0.0000375973,0.002028435],"genre_scores_gemma":[0.961316,0.0006763286,0.004847154,0.00006875327,0.00002090662,0.00006485881,0.02974516,0.00003040724,0.003230494],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008438697,"threshold_uncertainty_score":0.01677918,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04801696278381507,"score_gpt":0.2863035747665781,"score_spread":0.2382866119827631,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}