{"id":"W4389146527","doi":"10.1098/rspb.2023.1461","title":"Sub-communities of the vaginal microbiota in pregnant and non-pregnant women","year":2023,"lang":"en","type":"article","venue":"Proceedings of the Royal Society B Biological Sciences","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"National Institute on Minority Health and Health Disparities; National Institute of Dental and Craniofacial Research; National Institute of Allergy and Infectious Diseases; National Institute of Nursing Research; National Cancer Institute; National Institute of Mental Health; National Heart, Lung, and Blood Institute; National Institute on Aging; Center for AIDS Research, University of Washington; National Institutes of Health; National Institute on Drug Abuse; Good Ventures Foundation; Virginia Marine Resources Commission; Harvard University Center for AIDS Research; Harvard University; National Institute of Diabetes and Digestive and Kidney Diseases; Bill and Melinda Gates Foundation","keywords":"Dominance (genetics); Lactobacillus; Longitudinal study; Bacterial vaginosis; Pregnancy; Demography; Biology; Menstrual cycle; Medicine; Obstetrics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005679113,0.0001838033,0.0002975976,0.000590662,0.0002567681,0.0005819715,0.0001806052,0.0003966268,0.0009578874],"category_scores_gemma":[0.002823209,0.0002023491,0.0003486481,0.0004683397,0.0002401018,0.0002966854,0.0005748821,0.0003597982,0.000186852],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001654144,"about_ca_system_score_gemma":0.0001606064,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002240144,"about_ca_topic_score_gemma":0.003140382,"domain_scores_codex":[0.9995766,0.0002077063,0.00001858141,0.000108301,0.00003624388,0.00005249595],"domain_scores_gemma":[0.9993519,0.0002559487,0.000183606,0.00007336278,0.00005281483,0.00008239956],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001459936,0.0001171783,0.9288738,0.0001848132,0.0003516347,0.0002480249,0.002763583,0.0007293601,0.02529071,0.0004002378,0.0006188517,0.03896186],"study_design_scores_gemma":[0.00001331554,0.0002736982,0.9874479,0.00006126176,0.00009544267,0.000587427,0.002454352,0.004679868,0.001607163,0.001705547,0.001055381,0.00001868339],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.996971,0.0009635251,0.001182228,0.0001031944,0.000008323804,0.00001301478,0.0004341182,0.00001125925,0.0003133228],"genre_scores_gemma":[0.9981053,0.0002900564,0.001023289,0.00004790304,0.000007104936,0.00001780869,0.0003494628,0.000005467941,0.0001536451],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002240144,"threshold_uncertainty_score":0.004454136,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03031211139201511,"score_gpt":0.273364307189604,"score_spread":0.2430521957975889,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}