{"id":"W4389152502","doi":"10.3201/eid3001.231164","title":"Clade I–Associated Mpox Cases Associated with Sexual Contact, the Democratic Republic of the Congo","year":2023,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":182,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Agence Française de Développement; Institut de Recherche pour le Développement; U.S. Department of Agriculture; International Development Research Centre; U.S. Department of Defense","keywords":"Clade; Sexual contact; Monkeypox; Virology; Biology; Transmission (telecommunications); Sexual transmission; Contact tracing; Human immunodeficiency virus (HIV); Medicine; Genetics; Coronavirus disease 2019 (COVID-19); Phylogenetics; Gene; Infectious disease (medical specialty); Disease; Pathology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003210039,0.0002069855,0.0003181387,0.0001308966,0.0007985794,0.00003948389,0.0003603111,0.0001509028,0.0002827797],"category_scores_gemma":[0.004216186,0.0001142194,0.000138867,0.0009979228,0.0004421884,0.0001040321,0.0001729339,0.0004221454,0.00009421444],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009469004,"about_ca_system_score_gemma":0.0003131201,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009673917,"about_ca_topic_score_gemma":0.001573656,"domain_scores_codex":[0.9978672,0.0008020625,0.0002953767,0.0002678947,0.0001584625,0.0006089556],"domain_scores_gemma":[0.9976686,0.001379875,0.0002601931,0.0004266749,0.0002110286,0.00005368119],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001979231,0.0005488509,0.8665075,0.00004465206,0.002657619,0.00006671926,0.0008215587,0.0001648512,0.02289096,0.0004955266,0.1039506,0.001653254],"study_design_scores_gemma":[0.002050762,0.0005449752,0.9900101,0.0001083241,0.0002809903,0.00005320556,0.0005230508,0.00006480589,0.002114132,0.0002826237,0.003714523,0.0002525055],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9961431,0.0008435248,0.000003453402,0.0006493696,0.0003934999,0.0003925596,0.0003039547,0.0003757306,0.0008948053],"genre_scores_gemma":[0.9947216,0.00004633181,1.143719e-7,0.0002730743,0.00002988704,0.00007559447,0.0001921901,0.00002770378,0.004633539],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1235026,"threshold_uncertainty_score":0.6142107,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01564003322648532,"score_gpt":0.2599483173928209,"score_spread":0.2443082841663355,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}