{"id":"W4389180569","doi":"10.1099/mgen.0.001149","title":"Plasmid-encoded lactose metabolism and mobilized colistin resistance (mcr-9) genes in Salmonella enterica serovars isolated from dairy facilities in the 1980s","year":2023,"lang":"en","type":"article","venue":"Microbial Genomics","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"Saskatchewan Research Council (Canada); National Research Council Canada; University of Regina","funders":"H2020 Marie Skłodowska-Curie Actions; Natural Sciences and Engineering Research Council of Canada; Saskatchewan Health Research Foundation","keywords":"Salmonella enterica; Plasmid; Microbiology; Salmonella; Serotype; Colistin; Lactose; Gene; Biology; Bacteria; Genetics; Antibiotics; Food science","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003555302,0.0002627263,0.0003402108,0.0000915207,0.0000887275,0.00008915078,0.0004025067,0.0002213872,0.00001842011],"category_scores_gemma":[0.00005912319,0.0002199906,0.00007058146,0.0002112642,0.000208177,0.000008763179,0.000221827,0.0001647646,0.00002271803],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004520538,"about_ca_system_score_gemma":0.0000749092,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003724838,"about_ca_topic_score_gemma":0.003627097,"domain_scores_codex":[0.9982331,0.0002232269,0.0004584262,0.0005540843,0.00009036756,0.0004407382],"domain_scores_gemma":[0.9993054,0.00006257492,0.00009319173,0.0004589916,0.00003326589,0.00004659783],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0008098871,0.00004216339,0.001973841,0.00003430585,0.00002970933,0.00002584407,0.001604684,0.00009725858,0.9939877,0.00001481371,0.001248618,0.0001311642],"study_design_scores_gemma":[0.005576097,0.0001335244,0.07438416,0.0001267312,0.00006629064,0.00002636199,0.005557434,0.0005455677,0.5964006,0.0005177201,0.3153754,0.001290183],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972618,0.001151648,0.00007112382,0.0001858776,0.0002239799,0.0004128357,0.0005223398,0.0000228126,0.0001475936],"genre_scores_gemma":[0.9949555,0.001948285,0.0006820449,0.0002328363,0.0001168984,0.00001860078,0.0005719429,0.00003667447,0.001437182],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3975871,"threshold_uncertainty_score":0.8970955,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01234062853487035,"score_gpt":0.2290861383516438,"score_spread":0.2167455098167734,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}