{"id":"W4389303241","doi":"10.1021/acs.jproteome.3c00324","title":"Proteomic Evolution from Acute to Post-COVID-19 Conditions","year":2023,"lang":"en","type":"article","venue":"Journal of Proteome Research","topic":"Long-Term Effects of COVID-19","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; Queen's University; Health Sciences Centre; Université de Sherbrooke; University of Toronto; Foothills Medical Centre; Jewish General Hospital; St. Michael's Hospital; BC Centre for Disease Control; Sunnybrook Health Science Centre; Centre for Advancing Health Outcomes; McGill University; McGill University Health Centre; St. Paul's Hospital; Kingston General Hospital; University of Calgary; Mount Sinai Hospital; Vancouver General Hospital; Surrey Memorial Hospital; University of British Columbia; University of Victoria","funders":"Providence Health Care Research Institute; Canadian Institutes of Health Research; Warren Y. Soper Charitable Trust; Fondation De Famille Alvin Segal; University of Pennsylvania; Genome British Columbia; Connaught Fund; University of Alberta; Providence Health Care; Genome Canada; St. Paul's Foundation; McGill University Health Centre; University of Ottawa; McGill University; Jewish General Hospital; Terry Fox Research Institute","keywords":"DLCO; Innate immune system; Biology; Diffusing capacity; Immunology; Internal medicine; Coronavirus disease 2019 (COVID-19); Immune system; Lung; Medicine; Andrology; Lung function; Disease","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.004937859,0.0002037362,0.0005363031,0.002542107,0.0003856662,0.0001194242,0.0005582209,0.0002055698,0.0006202383],"category_scores_gemma":[0.01432734,0.0001644377,0.0002767508,0.002108071,0.0002051552,0.0003877312,0.000291985,0.001460882,0.001951699],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001965981,"about_ca_system_score_gemma":0.004355282,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005502862,"about_ca_topic_score_gemma":0.0000189924,"domain_scores_codex":[0.9951028,0.0006604943,0.00068669,0.0003717493,0.002364638,0.0008136528],"domain_scores_gemma":[0.9947306,0.001166141,0.0002382168,0.0005814019,0.001556573,0.00172708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002413932,0.0002100364,0.01134653,0.0004620458,0.0003924661,0.003193691,0.0007417534,0.0001039575,0.9278374,0.0002591528,0.05276677,0.0002722194],"study_design_scores_gemma":[0.01953112,0.0193657,0.7745565,0.003429865,0.000617985,0.003030251,0.001566642,0.000978918,0.0970003,0.0478725,0.03098218,0.001068107],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8784158,0.00007400669,0.001835374,0.1150653,0.0002210997,0.003982387,0.0001235741,0.0001020572,0.0001803926],"genre_scores_gemma":[0.9896371,0.00005652305,0.004597884,0.001610807,0.001382374,0.0004309477,0.00006749575,0.00007049734,0.002146337],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8308371,"threshold_uncertainty_score":0.9988254,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06577148210028709,"score_gpt":0.4540362647245265,"score_spread":0.3882647826242394,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}