{"id":"W4389335419","doi":"10.1016/j.jviromet.2023.114859","title":"Comparison of quantitative PCR and digital PCR assays for quantitative detection of infectious bronchitis virus (IBV) genome","year":2023,"lang":"en","type":"article","venue":"Journal of Virological Methods","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Egg Farmers of Canada; Agriculture and Agri-Food Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Poultry Research Council","keywords":"Digital polymerase chain reaction; Biology; Real-time polymerase chain reaction; Serial dilution; Genome; Virology; Repeatability; Polymerase chain reaction; Plasmid; Molecular biology; DNA; Gene; Genetics; Chemistry; Chromatography","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001426413,0.0001608429,0.0007181814,0.00008539353,0.0002002114,0.00002892037,0.0001375128,0.0001487411,0.00002579207],"category_scores_gemma":[0.002818219,0.00006757756,0.000265784,0.0005775808,0.0003579319,0.0002000721,0.0001076558,0.0002400309,0.000002997379],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003154497,"about_ca_system_score_gemma":0.000007778292,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003861181,"about_ca_topic_score_gemma":0.00007693531,"domain_scores_codex":[0.9981917,0.000431918,0.0007669461,0.0001898715,0.0002033681,0.0002162672],"domain_scores_gemma":[0.9942077,0.004443285,0.0008811488,0.00003519899,0.0003576445,0.00007496851],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004823033,0.0002197517,0.01482451,0.00002145194,0.0001493299,0.000002017858,0.0003593231,0.0001174678,0.9209287,0.00111977,0.00002228241,0.06175314],"study_design_scores_gemma":[0.0006503793,0.02734649,0.8804083,0.00003990118,0.0001505646,0.0000469272,0.003422352,0.001055094,0.0675154,0.01649139,0.002604638,0.0002686051],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9701054,0.000744374,0.02829537,0.0001319949,0.0001666139,0.0002008569,0.0000883765,0.00002816514,0.0002388828],"genre_scores_gemma":[0.9824327,0.0002832334,0.01715969,0.00002000979,0.00007659876,0.00001036404,0.000003101931,0.000001948558,0.00001236997],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8655838,"threshold_uncertainty_score":0.3373874,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1590543643705744,"score_gpt":0.4258330185807579,"score_spread":0.2667786542101835,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}