{"id":"W4389429954","doi":"10.1016/j.cell.2023.11.014","title":"Next-generation primate genomics: New genome assemblies unlock new questions","year":2023,"lang":"en","type":"article","venue":"Cell","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Institute for Advanced Research","funders":"National Institute on Aging; National Institutes of Health","keywords":"Biology; Genomics; Genome; Computational biology; Evolutionary biology; Primate; Genetics; Gene; Neuroscience","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008646886,0.0001614796,0.0001283958,0.0000571472,0.0001408041,0.00006586954,0.00017476,0.0001052708,0.0000247919],"category_scores_gemma":[0.00001960571,0.0001676835,0.00007925065,0.0001275322,0.00002597968,0.000001499281,0.0001629325,0.00005254489,0.0002710955],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002038883,"about_ca_system_score_gemma":0.0002190826,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006911605,"about_ca_topic_score_gemma":0.00006680087,"domain_scores_codex":[0.999113,0.00002254461,0.0001845655,0.0003328705,0.00007281526,0.0002741779],"domain_scores_gemma":[0.9994324,0.000007486649,0.00006132622,0.0003196989,0.00004368013,0.0001353654],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000005876329,0.00001153468,0.0001489886,0.000007230281,0.00002823327,0.000001311331,0.000178252,0.001533083,0.9730176,0.0000454078,0.02387993,0.001142574],"study_design_scores_gemma":[0.0004785222,0.0001553731,0.0043308,0.00000331188,0.00003818214,0.0000048623,0.0001476245,0.0003630616,0.5121055,0.0005513583,0.481471,0.0003504178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9898381,0.004298705,0.001235848,0.0004017501,0.0004222073,0.0001952401,0.00002267495,0.00002599111,0.003559508],"genre_scores_gemma":[0.9641189,0.005090214,0.002827049,0.0003241565,0.001814471,0.00001535828,0.0003670975,0.00004767892,0.02539506],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4609121,"threshold_uncertainty_score":0.6837935,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0366330611722435,"score_gpt":0.2578374282869679,"score_spread":0.2212043671147244,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}