{"id":"W4389453178","doi":"10.3138/jammi-2023-05-08","title":"Highly pathogenic avian influenza: Unprecedented outbreaks in Canadian wildlife and domestic poultry","year":2023,"lang":"en","type":"article","venue":"Journal of the Association of Medical Microbiology and Infectious Disease Canada","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Saint John Regional Hospital; Canadian Veterinary Medical Association; McMaster University; Nova Scotia Health Authority; Canadian Medical Association; Canadian Food Inspection Agency; University of Alberta; Université de Montréal; University of Saskatchewan; University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Canadian Immunization Research Network; National Institutes of Health; Genome Atlantic; Association of Medical Microbiology and Infectious Disease Canada; Sanofi","keywords":"Influenza A virus subtype H5N1; Outbreak; Highly pathogenic; Wildlife; Virology; Geography; Poultry farming; Biology; Veterinary medicine; Medicine; Ecology; Virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.001245655,0.0001028812,0.000348543,0.0002491171,0.0001209795,0.000007578887,0.0001170697,0.0001692975,0.00002484762],"category_scores_gemma":[0.008411431,0.00007101145,0.00006744254,0.0003510322,0.0001370076,0.00004089771,0.00007259689,0.0005025932,0.000001156042],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0009823401,"about_ca_system_score_gemma":0.004932144,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4913348,"about_ca_topic_score_gemma":0.8641782,"domain_scores_codex":[0.9984807,0.0002536021,0.0004656629,0.0001069343,0.0003536435,0.0003394355],"domain_scores_gemma":[0.9982998,0.0004285724,0.0003081627,0.00009193375,0.0002557261,0.0006157694],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00008667661,0.000027526,0.9840574,0.00007696346,0.0002150892,0.0001224352,0.00007713024,0.00001182063,0.0006677193,0.00004037004,0.01425813,0.0003587728],"study_design_scores_gemma":[0.002128416,0.00007575638,0.9739299,0.0002458532,0.0001011031,0.0001078193,0.00009870664,0.00002322664,0.00001760478,0.00007049827,0.02313547,0.00006563279],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9760801,0.001287566,2.568819e-7,0.02199034,0.000339859,0.0001453084,0.00008317256,0.000005162849,0.00006829354],"genre_scores_gemma":[0.9918753,0.001008282,0.000001418096,0.006915025,0.00008126708,0.000003285747,0.000006607005,0.000007081784,0.000101763],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3728433,"threshold_uncertainty_score":0.9999412,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01089297337031649,"score_gpt":0.2896683683140112,"score_spread":0.2787753949436947,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}