{"id":"W4389574888","doi":"10.1159/000535684","title":"Genome Mapping Nomenclature","year":2023,"lang":"en","type":"review","venue":"Cytogenetic and Genome Research","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; University of Ottawa","funders":"","keywords":"Nomenclature; Genome; Biology; Reference genome; Genetics; Computational biology; Structural variation; Copy-number variation; Gene; Taxonomy (biology)","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000980441,0.0004154542,0.0007979462,0.0004332987,0.0004271078,0.0001460925,0.0005816021,0.0006256726,0.00008662521],"category_scores_gemma":[0.0000642638,0.0003675054,0.0002707391,0.0005751771,0.0002535964,0.000002689161,0.0009833049,0.0005361409,0.0004204919],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007089042,"about_ca_system_score_gemma":0.0005480686,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000148308,"about_ca_topic_score_gemma":0.000008693028,"domain_scores_codex":[0.997083,0.0003358035,0.0005272253,0.000874503,0.0003445371,0.0008349369],"domain_scores_gemma":[0.9986767,0.00006554533,0.0001194205,0.0007262868,0.0001641034,0.0002480135],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00007350311,0.0003419857,0.0001650733,0.09374974,0.004788091,0.0003118334,0.002128271,0.00004225861,0.02193443,0.002514971,0.001769478,0.8721803],"study_design_scores_gemma":[0.0001236702,0.000145168,0.0002096618,0.0004850033,0.00007457042,0.00009457921,0.0001667637,5.077945e-7,0.00001141145,0.0001865024,0.9980986,0.0004035388],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001431275,0.995766,0.00006030278,0.00002506506,0.00009522613,0.0008303326,0.0002407548,0.00002371396,0.001527313],"genre_scores_gemma":[0.0004631178,0.982276,0.000245641,0.00001380244,0.0009423282,0.0002781418,0.0009706237,0.0001194099,0.01469097],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9963291,"threshold_uncertainty_score":0.9998777,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1865926594831883,"score_gpt":0.3999511320091945,"score_spread":0.2133584725260062,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}