{"id":"W4389614854","doi":"10.3390/microorganisms11122972","title":"Draft Genome of Nocardia canadensis sp. nov. Isolated from Petroleum-Hydrocarbon-Contaminated Soil","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; King Saud University; Génome Québec; Genome Canada","keywords":"Biology; Genome; 16S ribosomal RNA; Whole genome sequencing; GC-content; Strain (injury); Nocardia; Gene; Genetics; Ribosomal RNA; Microbiology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001002601,0.002006973,0.002293911,0.002488424,0.0009770078,0.001286311,0.00104277,0.001251618,0.002204679],"category_scores_gemma":[0.002371643,0.0006420831,0.001632048,0.00496132,0.0003329818,0.0008038875,0.0008465177,0.001730365,0.001915528],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007295398,"about_ca_system_score_gemma":0.002206921,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005614358,"about_ca_topic_score_gemma":0.004945151,"domain_scores_codex":[0.9992591,0.00008149586,0.0001027291,0.0002197172,0.0002514478,0.0000856121],"domain_scores_gemma":[0.9989427,0.0002372317,0.0002172626,0.00007975862,0.0003775935,0.0001455114],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.002425539,0.0004578344,0.01408044,0.01220838,0.0005939667,0.00296885,0.00128224,0.003154699,0.8643312,0.0006771236,0.01930253,0.07851702],"study_design_scores_gemma":[0.001035217,0.003204476,0.2766233,0.00291536,0.00542389,0.0121378,0.002570468,0.01735771,0.2243887,0.002467075,0.4513093,0.0005667225],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.4816601,0.0209752,0.04321396,0.002090051,0.001655654,0.001543217,0.4368681,0.002896291,0.009097476],"genre_scores_gemma":[0.1413141,0.007833937,0.09691402,0.0004345589,0.0002013633,0.0010685,0.7480281,0.0006446888,0.003560738],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005614358,"threshold_uncertainty_score":0.01116335,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005527429604105558,"score_gpt":0.1919088104446038,"score_spread":0.1863813808404982,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}