{"id":"W4389925773","doi":"10.1093/ofid/ofad639","title":"Epidemiology, Risk Factors, and Prophylaxis Use for <i>Pneumocystis jirovecii</i> Pneumonia in the Non-HIV Population: A Retrospective Study in Québec, Canada","year":2023,"lang":"en","type":"article","venue":"Open Forum Infectious Diseases","topic":"Pneumocystis jirovecii pneumonia detection and treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; University of Alberta","funders":"","keywords":"Medicine; Epidemiology; Pneumocystis jirovecii; Retrospective cohort study; Human immunodeficiency virus (HIV); Pneumonia; Pneumocystis pneumonia; Population; Intensive care medicine; Pediatrics; Family medicine; Internal medicine; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005156307,0.0004072689,0.0008752753,0.0002950108,0.0004626364,0.00010218,0.0002255355,0.0001032545,0.00001326117],"category_scores_gemma":[0.002208871,0.0002825589,0.0001309204,0.000917325,0.00007633555,0.0003023077,0.0001997606,0.0003545189,0.000008149255],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001070684,"about_ca_system_score_gemma":0.00050031,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8968602,"about_ca_topic_score_gemma":0.9724995,"domain_scores_codex":[0.9972493,0.0004190886,0.0006407718,0.0007832623,0.0002862562,0.0006212911],"domain_scores_gemma":[0.9975401,0.001330561,0.0002624794,0.000556384,0.00007786251,0.0002326288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002727904,0.0007807036,0.996217,0.00003150995,0.000119402,0.0001636374,0.0003136743,0.0001254828,0.00001633555,0.0000628409,0.001229783,0.0006668968],"study_design_scores_gemma":[0.003961282,0.001769559,0.9905716,0.00005655645,0.0001726802,0.00005369742,0.001397081,0.0004646707,0.000004441047,0.0005151197,0.00075918,0.00027409],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9907852,0.0001331449,0.000008195853,0.002074139,0.0002275288,0.005942268,0.0005932932,0.00008886654,0.000147298],"genre_scores_gemma":[0.99707,0.00008179789,0.000009425229,0.0005516859,0.00004146276,0.001723556,0.0001771951,0.00004931321,0.0002955643],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07563935,"threshold_uncertainty_score":0.9999626,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0229459187051826,"score_gpt":0.2991653008661547,"score_spread":0.2762193821609721,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}