{"id":"W4390012273","doi":"10.1101/2023.12.19.572379","title":"Essential magnetosome proteins MamI and MamL from magnetotactic bacteria interact in mammalian cells","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Geomagnetism and Paleomagnetism Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University; Lawson Health Research Institute; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Cancer Care Ontario","keywords":"Magnetosome; Green fluorescent protein; Fusion protein; Protein subcellular localization prediction; Magnetotactic bacteria; Cell biology; Biology; Chemistry; Biochemistry; Bacteria; Gene; Genetics; Recombinant DNA","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002822824,0.0002114831,0.0003152069,0.0001546859,0.0002042259,0.0004202396,0.0002541355,0.0004160078,0.0004378037],"category_scores_gemma":[0.000231262,0.0001731437,0.0002405647,0.0001323097,0.0002161404,0.0002468789,0.0004400969,0.0003348834,0.0005528245],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005705297,"about_ca_system_score_gemma":0.0001926951,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006628601,"about_ca_topic_score_gemma":0.0006968829,"domain_scores_codex":[0.999742,0.00005497277,0.00002433795,0.00006094827,0.00008147361,0.00003621253],"domain_scores_gemma":[0.9998789,0.00003065816,0.00002719283,0.00002173305,0.00001973367,0.00002175225],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00003022406,0.000004213762,0.0002130585,0.00002484473,0.000002614795,0.00003240213,0.0000119013,0.00002023198,0.9993275,0.00008043002,0.00002133905,0.000231251],"study_design_scores_gemma":[0.00001613757,0.0001127401,0.007888932,0.00001229641,0.00001258942,0.0004497552,0.00007106497,0.001978186,0.9843164,0.0001048889,0.005028962,0.000008087331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9849625,0.003233466,0.008172079,0.0002711855,0.00003130079,0.00004614739,0.0009028692,0.0001076773,0.002272823],"genre_scores_gemma":[0.9876906,0.0008034703,0.006929254,0.0001683608,0.000009228363,0.00008328585,0.001796442,0.0000390015,0.0024803],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006628601,"threshold_uncertainty_score":0.004139543,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009069071899256724,"score_gpt":0.2099255301767525,"score_spread":0.2008564582774958,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}