{"id":"W4390139947","doi":"10.1101/2023.12.21.572949","title":"A new guest to the blood feast: a novel symbiotic lineage associated with a haematophagous leech from the genus <i>Haementeria</i>","year":2023,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Leech Biology and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Royal Ontario Museum; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; European Commission","keywords":"Biology; Clade; Lineage (genetic); Obligate; Buchnera; Genome; Comparative genomics; Candidatus; Symbiosis; Genus; Evolutionary biology; Providencia; Monophyly; Phylogenetics; Zoology; Whole genome sequencing; Genomics; Genetics; Gene; Ecology; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008638639,0.0002433133,0.0002386539,0.0005591455,0.0008013612,0.0005427517,0.0001950685,0.0004799414,0.001259014],"category_scores_gemma":[0.0001429054,0.0001226866,0.0002242769,0.0003752066,0.0004016156,0.0002720158,0.0008852965,0.000352783,0.0003276555],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001482108,"about_ca_system_score_gemma":0.0001640202,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008303113,"about_ca_topic_score_gemma":0.001503288,"domain_scores_codex":[0.9999102,0.000008748339,0.00000565414,0.00003770788,0.00001201179,0.00002563308],"domain_scores_gemma":[0.999838,0.00001565518,0.0000491834,0.00001688614,0.00002502395,0.00005517028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002874046,0.00004091778,0.05472487,0.00008039968,0.00001887759,0.001907953,0.001342323,0.00002209912,0.9350725,0.000135286,0.0001058689,0.006261474],"study_design_scores_gemma":[0.00001593598,0.0009016584,0.9191077,0.0000566452,0.00007698717,0.01014182,0.003198279,0.0005475839,0.05570867,0.0002077651,0.009985138,0.00005183493],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986877,0.0001730991,0.0004635456,0.00002855702,0.000008525377,0.000009830537,0.0001075912,0.00001543031,0.0005057353],"genre_scores_gemma":[0.9963049,0.0001264106,0.001836943,0.00006471273,0.00001766863,0.00001131595,0.0003399256,0.00001182331,0.001286293],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001259014,"threshold_uncertainty_score":0.004211843,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02522008488095763,"score_gpt":0.2383543510326561,"score_spread":0.2131342661516984,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}