{"id":"W4390275094","doi":"10.1101/cshperspect.a041647","title":"Breast Cancer Histopathology in the Age of Molecular Oncology","year":2023,"lang":"en","type":"article","venue":"Cold Spring Harbor Perspectives in Medicine","topic":"Breast Cancer Treatment Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; University of British Columbia; BC Cancer Agency","funders":"Cancer Research Society","keywords":"University hospital; Columbia university; Medicine; Family medicine; Medical laboratory; General surgery; Gynecology; Pathology; Media studies; Sociology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037988,0.0001363854,0.0002870955,0.0001631807,0.00002923561,0.000001653369,0.0002322517,0.00008748421,0.00001474634],"category_scores_gemma":[0.0001098814,0.0001024994,0.00004276498,0.0003983409,0.0004304967,0.000002274816,0.00009740637,0.0001426201,0.000002139069],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001693053,"about_ca_system_score_gemma":0.00007183713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007864508,"about_ca_topic_score_gemma":0.0005360072,"domain_scores_codex":[0.9989541,0.0001333562,0.0002045367,0.0003311495,0.0001327328,0.0002441458],"domain_scores_gemma":[0.9994995,0.00005313341,0.00006705024,0.0003034568,0.00005528232,0.00002155107],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0002513097,0.0002585372,0.108853,0.0000485675,0.00007499078,0.0007356822,0.007495063,0.0001667296,0.8725739,0.008368223,0.0005670771,0.0006069743],"study_design_scores_gemma":[0.001594763,0.0001863301,0.9859291,0.00009097344,0.0000315887,0.0000121677,0.004223689,0.000009015151,0.004610252,0.00005701723,0.003138357,0.0001167681],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9832672,0.008244453,0.00004307827,0.007059369,0.0001858365,0.0002252955,0.00001325135,0.00001405304,0.0009474726],"genre_scores_gemma":[0.9973171,0.001960726,0.00006198322,0.0002819028,0.0001833884,0.0001497801,0.000003119857,0.00001613716,0.00002581855],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8770761,"threshold_uncertainty_score":0.4179806,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01759466540991732,"score_gpt":0.3139325765838331,"score_spread":0.2963379111739157,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}