{"id":"W4390404864","doi":"10.3390/microorganisms12010064","title":"Genomics of Re-Emergent Aeromonas salmonicida in Atlantic Salmon Outbreaks","year":2023,"lang":"en","type":"article","venue":"Microorganisms","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Aeromonas salmonicida; Biology; Psychrophile; Virulence; Salmo; Antibiotic resistance; Microbiology; Plasmid; Genetics; Aeromonas; Comparative genomics; Genome; Genomics; Population; Gene; Antibiotics; Bacteria; Fishery; Fish <Actinopterygii>","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001346961,0.0001821965,0.0002067834,0.0004508632,0.0002113438,0.0003168088,0.0001024434,0.000225331,0.0006324874],"category_scores_gemma":[0.0002874345,0.0001117484,0.0003244541,0.000564105,0.00014411,0.0001543724,0.0004105066,0.000270165,0.0001584356],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003117884,"about_ca_system_score_gemma":0.0004787347,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005709926,"about_ca_topic_score_gemma":0.005696525,"domain_scores_codex":[0.9998579,0.00001375133,0.00001133028,0.00005179808,0.00002652297,0.00003857987],"domain_scores_gemma":[0.9998057,0.00002570746,0.00008323954,0.00001053496,0.00003911175,0.00003574765],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004264521,0.0001156804,0.284119,0.0001965132,0.0000840026,0.0007074117,0.00124964,0.0005119371,0.6978861,0.0001701901,0.0002982852,0.0142348],"study_design_scores_gemma":[0.000005698502,0.0001941836,0.9921183,0.00001814817,0.00003340815,0.0003470129,0.0009592079,0.0005241722,0.004625797,0.00007420466,0.001092923,0.000006963411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985838,0.000166561,0.0002405128,0.00003714002,0.000001885387,0.000008712173,0.000610053,0.000005726745,0.0003456563],"genre_scores_gemma":[0.9962909,0.0002509487,0.0007452461,0.0000652615,0.000004615438,0.0000198173,0.00193896,0.000006591284,0.0006775571],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005709926,"threshold_uncertainty_score":0.01135337,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01302180694246569,"score_gpt":0.2325282020129008,"score_spread":0.2195063950704352,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}