{"id":"W4390508023","doi":"10.1093/gigascience/giad103","title":"Evolutionary genomics of three agricultural pest moths reveals rapid evolution of host adaptation and immune-related genes","year":2024,"lang":"en","type":"article","venue":"GigaScience","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Animal and Plant Health Inspection Service; Indian Agricultural Research Institute; University of Florida; U.S. Department of Agriculture","keywords":"Biology; Gene family; PEST analysis; Genome; Host (biology); Host adaptation; Gene; Adaptation (eye); Phylogenetics; Genetics; Evolutionary biology; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001759854,0.0002875976,0.0002404156,0.0006259859,0.0003016401,0.0003952273,0.0001969456,0.0003525435,0.0006492566],"category_scores_gemma":[0.0002972486,0.0001537042,0.000456464,0.0005219357,0.0001552265,0.0002392836,0.0004438823,0.0004680518,0.0002392834],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003776329,"about_ca_system_score_gemma":0.0001500592,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001207434,"about_ca_topic_score_gemma":0.001852658,"domain_scores_codex":[0.9998693,0.00001279991,0.000007518689,0.00005400802,0.00002872618,0.00002763112],"domain_scores_gemma":[0.9997938,0.00004381994,0.00006482167,0.00001398789,0.00003437682,0.00004923924],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0004106316,0.0000609017,0.03240395,0.0001844602,0.0001015817,0.0002895403,0.0005614478,0.0003917734,0.9534798,0.0001553854,0.0001297888,0.01183072],"study_design_scores_gemma":[0.00002627886,0.000290543,0.9694215,0.00003599233,0.0001030491,0.001162958,0.0004470127,0.002156147,0.02126317,0.0002221001,0.004850443,0.00002073222],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.997068,0.000389973,0.000856285,0.00003295974,0.000002690581,0.00001074808,0.00101248,0.00003210801,0.0005947924],"genre_scores_gemma":[0.9879335,0.0004647604,0.004262893,0.0001243266,0.000008359501,0.00002979213,0.006333186,0.00006018956,0.000783034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001207434,"threshold_uncertainty_score":0.002739966,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01215219813051643,"score_gpt":0.2039241490140079,"score_spread":0.1917719508834915,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}