{"id":"W4390600689","doi":"10.1093/jbmr/zjad017","title":"Alteration in the gut microbiome is associated with changes in bone metabolism after laparoscopic sleeve gastrectomy","year":2024,"lang":"en","type":"article","venue":"Journal of Bone and Mineral Research","topic":"Diet and metabolism studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"National Center for Advancing Translational Sciences; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; University of California, San Francisco; National Institutes of Health; Northern California Institute for Research and Education; Amgen; U.S. Department of Veterans Affairs","keywords":"Bone remodeling; Microbiome; Sleeve gastrectomy; Medicine; N-terminal telopeptide; Internal medicine; Obesity; Endocrinology; Feces; Gut flora; Physiology; Gastroenterology; Biology; Weight loss; Bioinformatics; Immunology; Microbiology; Biochemistry; Gastric bypass","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002719215,0.0002093195,0.0004552139,0.0002927182,0.000260487,0.0003960432,0.0001191329,0.0002777806,0.0008382968],"category_scores_gemma":[0.0008099296,0.0002177982,0.0004114543,0.0003247518,0.0002421557,0.0002014432,0.000463213,0.0004833528,0.00009963668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002230722,"about_ca_system_score_gemma":0.0002135986,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001482953,"about_ca_topic_score_gemma":0.002060487,"domain_scores_codex":[0.9998186,0.00003895219,0.00002015251,0.0000456301,0.00003368473,0.00004298034],"domain_scores_gemma":[0.9994728,0.0000578243,0.0002479786,0.00003122887,0.00004325953,0.0001469905],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00144914,0.00008283546,0.9884539,0.00002135436,0.00008228635,0.0001966324,0.00008219137,0.00006477414,0.005931161,0.00001171518,0.00006412509,0.003559849],"study_design_scores_gemma":[0.000006058823,0.0002333317,0.9991813,0.000003190806,0.00001693463,0.0001505403,0.00007530442,0.00007852579,0.0001903654,0.000009266998,0.00005296984,0.000002147084],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9997212,0.0001375705,0.00003915471,0.00001399029,0.000001899572,0.000001686848,0.00003827273,0.000001173048,0.00004493441],"genre_scores_gemma":[0.9996545,0.00006465491,0.0000555984,0.00001540047,0.000004008016,0.000003157049,0.00009907442,0.000001129189,0.0001023893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001482953,"threshold_uncertainty_score":0.002948642,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04075442302075757,"score_gpt":0.3528903167212932,"score_spread":0.3121358937005356,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}