{"id":"W4390604311","doi":"10.1093/infdis/jiae004","title":"Association of Oral Microbiome With Oral Human Papillomavirus Infection: A Population Study of the National Health and Nutrition Examination Survey, 2009–2012","year":2024,"lang":"en","type":"article","venue":"The Journal of Infectious Diseases","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University; University of Toronto","funders":"NHLBI Division of Intramural Research; Division of Intramural Research, National Institute of Allergy and Infectious Diseases; National Institute of Allergy and Infectious Diseases; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; National Institute on Drug Abuse","keywords":"Oral Microbiome; UniFrac; Microbiome; Odds ratio; Population; Medicine; Confidence interval; Logistic regression; HPV infection; Biology; Internal medicine; Immunology; Cervical cancer; Cancer; Bioinformatics; Genetics; Environmental health","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001239005,0.0002987671,0.0003625377,0.0004648462,0.0004644733,0.0005686886,0.0003937343,0.0005255841,0.001072702],"category_scores_gemma":[0.002590415,0.0003921991,0.0005829897,0.0009375598,0.0002506927,0.0004637663,0.0006051727,0.0005950547,0.000236035],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003828311,"about_ca_system_score_gemma":0.0004263322,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01339193,"about_ca_topic_score_gemma":0.01512204,"domain_scores_codex":[0.9993844,0.0001433523,0.00006409566,0.0001904854,0.0001347205,0.0000828592],"domain_scores_gemma":[0.9991288,0.00008824698,0.0003674998,0.0001263657,0.0001688045,0.0001203931],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00004704657,0.0000224827,0.9990709,0.000007896515,0.00007664971,0.00001249186,0.00004521216,0.00001244694,0.0001751924,0.000004211145,0.00006218949,0.0004632273],"study_design_scores_gemma":[0.000003230916,0.00003931698,0.9996179,0.000003091329,0.00003213834,0.00005966474,0.00008429402,0.0000447657,0.00002986917,0.000005242814,0.0000790627,0.000001544152],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998393,0.0001919575,0.0001383007,0.00003782233,0.000005788405,0.00001505328,0.001004999,0.000004009801,0.0002090404],"genre_scores_gemma":[0.999055,0.00007482389,0.0001430213,0.00002670361,0.000004447132,0.00001765378,0.0005484681,0.0000017543,0.0001283024],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01339193,"threshold_uncertainty_score":0.02662796,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02846257776069898,"score_gpt":0.3413803282970358,"score_spread":0.3129177505363368,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}