{"id":"W4390684171","doi":"10.1016/j.scienta.2024.112846","title":"An eFP reference gene expression atlas for mangosteen","year":2024,"lang":"en","type":"article","venue":"Scientia Horticulturae","topic":"Natural Compound Pharmacology Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Toronto","funders":"Universiti Kebangsaan Malaysia","keywords":"Transcriptome; Biology; Computational biology; Genome; Reference genome; De novo transcriptome assembly; Garcinia mangostana; Genomics; Sequence assembly; Gene; Bioinformatics; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005925829,0.001688788,0.001509609,0.004358612,0.001119311,0.001215642,0.001285124,0.0008146329,0.01846102],"category_scores_gemma":[0.0008321941,0.00072195,0.001108562,0.006288155,0.0002670061,0.0006182251,0.001022927,0.001326443,0.01400718],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006876523,"about_ca_system_score_gemma":0.001880253,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005697498,"about_ca_topic_score_gemma":0.01285929,"domain_scores_codex":[0.9992734,0.00006625068,0.00005935869,0.0002819847,0.0002117223,0.000107407],"domain_scores_gemma":[0.9995042,0.0001070536,0.0000964983,0.0000933449,0.0001503906,0.00004845691],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001533073,0.0001289164,0.01080029,0.01025323,0.0006585644,0.0009889018,0.0007679001,0.00411437,0.4988321,0.007347497,0.3009783,0.1635969],"study_design_scores_gemma":[0.00006649247,0.0001965059,0.03656793,0.0005013251,0.0004218964,0.001176715,0.0001321349,0.001825292,0.0436029,0.002404964,0.9130075,0.00009624573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.01926241,0.01112046,0.04403384,0.000257825,0.0005368617,0.0002303748,0.8754021,0.01962571,0.02953036],"genre_scores_gemma":[0.02061222,0.005675237,0.05203559,0.0004213343,0.00008739296,0.0009279239,0.8991827,0.003715967,0.01734154],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01846102,"threshold_uncertainty_score":0.06175828,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03593313232531185,"score_gpt":0.3076675204777064,"score_spread":0.2717343881523945,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}