{"id":"W4390698468","doi":"10.21203/rs.3.rs-3760178/v1","title":"Genome-guided isolation of Fervidibacter sacchari, an aerobic, hyperthermophilic polysaccharide-degrading specialist","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Manitoba; University of Calgary","funders":"Lawrence Livermore National Laboratory; National Institute of General Medical Sciences; Nuclear Safety and Security Commission; National Natural Science Foundation of China; Joint Genome Institute; Office of Science; National Aeronautics and Space Administration; U.S. Department of Energy; National Institutes of Health; National Science Foundation","keywords":"Hyperthermophile; Biology; Glycoside hydrolase; Polysaccharide; Phylum; Biochemistry; Microbiology; Archaea; Enzyme; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002426829,0.0004064915,0.0004287539,0.0003093471,0.0002210744,0.0005902937,0.0003255271,0.0006424522,0.0006346856],"category_scores_gemma":[0.0005761047,0.0001713918,0.0003540564,0.0004514059,0.0002255909,0.000220112,0.0005440009,0.0007702414,0.0005009338],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002715377,"about_ca_system_score_gemma":0.0004250055,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00234829,"about_ca_topic_score_gemma":0.002514867,"domain_scores_codex":[0.9997966,0.00001860323,0.000009167104,0.00005540167,0.00006886195,0.00005139203],"domain_scores_gemma":[0.999824,0.00005878513,0.00002236524,0.00003105102,0.00002934074,0.00003442438],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005383839,0.00002659496,0.0003874945,0.00002358163,0.000005809591,0.0000344954,0.00004649838,0.00008672398,0.9965416,0.00007453727,0.0001121354,0.00260677],"study_design_scores_gemma":[0.00006382635,0.0003429179,0.0346119,0.00001736881,0.00007702313,0.0006859467,0.0004270182,0.003483631,0.9530393,0.0003602097,0.006864703,0.00002611539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9837725,0.0005637814,0.009414646,0.0005301699,0.00009101201,0.00008950235,0.00321149,0.0001654198,0.002161504],"genre_scores_gemma":[0.9711915,0.0005762737,0.01530729,0.0002679485,0.0000277528,0.00006511576,0.008022073,0.00011392,0.004428212],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00234829,"threshold_uncertainty_score":0.004669249,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.08947535624174445,"score_gpt":0.3703724301508124,"score_spread":0.280897073909068,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}