{"id":"W4390788861","doi":"10.1002/9781118960608.gbm02079","title":"<i>Sodalinema</i>","year":2024,"lang":"en","type":"other","venue":"Bergey's Manual of Systematics of Archaea and Bacteria","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia; University of British Columbia","funders":"","keywords":"Biology; Polyphyly; Phylogenetic tree; Lineage (genetic); Genus; Salinity; Phylogenetics; Extreme environment; Genome; Botany; Zoology; Evolutionary biology; Bacteria; Ecology; Gene; Genetics; Clade","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002751063,0.000207385,0.0006920019,0.00008239927,0.00001897295,0.000004592623,0.0002955883,0.0002547631,0.009510755],"category_scores_gemma":[0.00001332524,0.0001693005,0.00008870962,0.00005434702,0.0004498119,0.0000231035,0.0005811591,0.0001445919,0.0005443447],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001511267,"about_ca_system_score_gemma":0.00001030515,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009152297,"about_ca_topic_score_gemma":0.001314832,"domain_scores_codex":[0.9989106,0.0001572703,0.0004719036,0.0001931703,0.0001116442,0.0001553949],"domain_scores_gemma":[0.9990861,0.00007248235,0.0004003022,0.0003855184,0.00000506796,0.00005048346],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00003396155,0.0001097711,0.0003761932,0.01649067,0.0003010711,0.000009202065,0.001286817,0.000003109686,0.03773559,0.002144638,0.9414068,0.0001021762],"study_design_scores_gemma":[0.0008876964,0.00102175,0.002001018,0.00981128,0.000788096,0.00009362726,0.0005505827,0.00006618924,0.003806545,0.01026777,0.9694169,0.001288594],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"other","genre_gemma":"other","genre_scores_codex":[0.1354536,0.001423471,0.00006012759,0.0002138264,0.001948789,0.001215564,0.0009419937,0.0001093189,0.8586333],"genre_scores_gemma":[0.3065941,0.0005373841,0.003926022,0.00008269634,0.0002776132,0.00002642919,0.0002175477,0.0003911569,0.6879471],"genre_candidate":"other","genre_consensus":"other","teacher_disagreement_score":0.1711405,"threshold_uncertainty_score":0.9913947,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008116144777584386,"score_gpt":0.2385421024676024,"score_spread":0.2304259576900181,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}