{"id":"W4390792190","doi":"10.1096/fj.202301739rr","title":"Mathematical modeling of fluid dynamics in in vitro gut fermentation systems: A new tool to improve the interpretation of microbial metabolism","year":2024,"lang":"en","type":"article","venue":"The FASEB Journal","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Cégep Garneau; Dawson College; Cegep de Thetford; Cegep de Trois-Rivieres; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biological system; Biochemical engineering; System dynamics; Chemistry; Metabolomics; Biology; Chromatography; Engineering; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006708445,0.001337647,0.0009823822,0.0005733867,0.000389305,0.001140918,0.000857312,0.001787809,0.001029306],"category_scores_gemma":[0.001851829,0.0004694003,0.001600843,0.0003634847,0.0006991899,0.0009282725,0.0008680964,0.001310253,0.0002836375],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008070666,"about_ca_system_score_gemma":0.0009969339,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008165326,"about_ca_topic_score_gemma":0.00308659,"domain_scores_codex":[0.9997125,0.0001053381,0.00002726907,0.00005612511,0.00007544857,0.00002321316],"domain_scores_gemma":[0.9990676,0.0005697971,0.0001481543,0.00006173276,0.0001262211,0.00002653248],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.00001307414,0.00003171974,0.0004735848,0.00005848739,0.00002074983,0.00005074682,0.00003574117,0.9844636,0.009139941,0.003158804,0.0001037465,0.002449801],"study_design_scores_gemma":[0.000001728973,0.000007011771,0.0000581698,0.000002311579,0.000002228205,0.000004029041,0.000003273735,0.9986616,0.0007003805,0.0003076132,0.0002480784,0.000003531989],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.05278381,0.0005079047,0.9428003,0.0002860822,0.0001007437,0.00009117562,0.0003049398,0.0004151366,0.002710004],"genre_scores_gemma":[0.8019788,0.001636679,0.1876574,0.0002325041,0.0001251104,0.0007898611,0.0006312173,0.0002926154,0.006655673],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.008165326,"threshold_uncertainty_score":0.01623559,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008712717301756467,"score_gpt":0.2664931876185409,"score_spread":0.2577804703167844,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}