{"id":"W4390876127","doi":"10.1101/2024.01.13.575302","title":"Genome assembly of the milky mangrove <i>Excoecaria agallocha</i>","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Cassava research and cyanide","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health PEI","funders":"Chinese University of Hong Kong","keywords":"Mangrove; Biology; Genome; Genome size; Evolutionary biology; Ecology; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002048014,0.0007025165,0.0006074382,0.001132805,0.0006878466,0.0009366847,0.0003361327,0.0004024872,0.001867356],"category_scores_gemma":[0.0006300516,0.0003323352,0.0008588634,0.001446399,0.0001972497,0.0002736658,0.0005405477,0.0005916993,0.001518679],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005942915,"about_ca_system_score_gemma":0.0009440958,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01335808,"about_ca_topic_score_gemma":0.01073817,"domain_scores_codex":[0.999797,0.00001795278,0.00001272334,0.0001005324,0.00004352487,0.00002817889],"domain_scores_gemma":[0.9997285,0.00005898425,0.00005618878,0.0000320358,0.00006388006,0.00006041494],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0007098923,0.00006064284,0.01041852,0.0008448287,0.0001125211,0.0009312981,0.0005827373,0.002824347,0.9595628,0.0005765873,0.003334323,0.02004152],"study_design_scores_gemma":[0.0001706172,0.0005290252,0.4198756,0.0004659268,0.0005817074,0.002372353,0.001285155,0.03052672,0.3824315,0.001531454,0.1600176,0.0002123835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8473768,0.002631206,0.03792012,0.000446859,0.0001643223,0.0002660751,0.1021373,0.003728319,0.005328965],"genre_scores_gemma":[0.6000748,0.001694547,0.08433476,0.0001482943,0.00006048076,0.0002474462,0.3030148,0.001647694,0.008777291],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01335808,"threshold_uncertainty_score":0.02656066,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01666502284264443,"score_gpt":0.2143142975390777,"score_spread":0.1976492746964333,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}