{"id":"W4391006147","doi":"10.1101/2024.01.16.575490","title":"Chromosomal-level genome assembly of the long-spined sea urchin <i>Diadema setosum</i> (Leske, 1778)","year":2024,"lang":"en","type":"preprint","venue":"bioRxiv (Cold Spring Harbor Laboratory)","topic":"Echinoderm biology and ecology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health PEI","funders":"Chinese University of Hong Kong","keywords":"Biology; Sea urchin; Genome; Coral reef; Evolutionary biology; Gene; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001428896,0.0004682011,0.0004810686,0.001093832,0.0004294317,0.0005341768,0.0002665526,0.0003089593,0.002031674],"category_scores_gemma":[0.0004028991,0.0002635135,0.0005259655,0.001155068,0.0001337261,0.0001742754,0.00044684,0.0003929693,0.001006774],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004191493,"about_ca_system_score_gemma":0.0005611567,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009715108,"about_ca_topic_score_gemma":0.01201126,"domain_scores_codex":[0.9999003,0.00001013097,0.000008677624,0.0000484168,0.00001902664,0.00001333557],"domain_scores_gemma":[0.999873,0.0000245857,0.00002342823,0.00001707692,0.00003642358,0.0000253235],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003464096,0.00002448531,0.007009556,0.0003200562,0.00004894983,0.0003805161,0.0002519799,0.0007850569,0.9757721,0.0003283606,0.0009752872,0.01375726],"study_design_scores_gemma":[0.000167864,0.0005293076,0.5018997,0.0002538977,0.0005245353,0.001669523,0.001156142,0.01177502,0.3897775,0.001218601,0.09090172,0.0001263336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9052694,0.001531572,0.02470962,0.0002772939,0.00007760107,0.0001329988,0.0636513,0.001243095,0.003107067],"genre_scores_gemma":[0.7242005,0.001296226,0.05460151,0.0001310232,0.00002763342,0.000203654,0.2141274,0.0006637617,0.004748385],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009715108,"threshold_uncertainty_score":0.01931715,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0197801444204137,"score_gpt":0.2073651883549697,"score_spread":0.187585043934556,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}