{"id":"W4391192524","doi":"10.3201/eid3002.230963","title":"<i>Salmonella</i> Vitkin Outbreak Associated with Bearded Dragons, Canada and United States, 2020–2022","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Ministry of Health; Ministry of Agriculture, Food and Rural Affairs; Public Health Ontario","funders":"","keywords":"Outbreak; Multilocus sequence typing; Serotype; Salmonella enterica; Whole genome sequencing; Salmonella; Biology; Typing; Veterinary medicine; Genome; Medicine; Virology; Genotype; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002251113,0.0004053023,0.0002004453,0.0007632767,0.002070372,0.001145891,0.0005924504,0.0003636906,0.001194278],"category_scores_gemma":[0.000593194,0.0002564533,0.0002386837,0.001091344,0.0005140101,0.0002189269,0.0007352154,0.0005964214,0.0001198582],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.01353,"about_ca_system_score_gemma":0.01382588,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.9691789,"about_ca_topic_score_gemma":0.9823235,"domain_scores_codex":[0.9996641,0.0000143033,0.00001443246,0.00004616458,0.0001027755,0.0001582699],"domain_scores_gemma":[0.9993491,0.00002440728,0.0001273929,0.00001572037,0.0002626774,0.0002208087],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001553905,0.00003345208,0.9903409,0.00003508885,0.00003550335,0.001389947,0.0007899876,0.0001923658,0.001566301,0.00006655532,0.001419535,0.003975034],"study_design_scores_gemma":[0.000006085388,0.0000411106,0.9950253,0.00003258164,0.00001557094,0.0008008152,0.002137745,0.0002339323,0.0003548,0.00001350034,0.00133031,0.000008209913],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963242,0.0002681886,0.00008872338,0.0001391661,0.00001152711,0.00003456446,0.001165382,0.00001947833,0.00194885],"genre_scores_gemma":[0.9975788,0.0002880259,0.0001660686,0.0001445716,0.00000662918,0.000007179045,0.00119369,0.00000428855,0.0006107516],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.03082108,"threshold_uncertainty_score":0.09816748,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005112594398040225,"score_gpt":0.196507293744859,"score_spread":0.1913946993468188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}