{"id":"W4391192524","doi":"10.3201/eid3002.230963","title":"<i>Salmonella</i> Vitkin Outbreak Associated with Bearded Dragons, Canada and United States, 2020–2022","year":2024,"lang":"en","type":"article","venue":"Emerging infectious diseases","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada; Ministry of Health; Ministry of Agriculture, Food and Rural Affairs; Public Health Ontario","funders":"","keywords":"Outbreak; Multilocus sequence typing; Serotype; Salmonella enterica; Whole genome sequencing; Salmonella; Biology; Typing; Veterinary medicine; Genome; Medicine; Virology; Genotype; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001457477,0.0002414884,0.0002692295,0.0000302573,0.0002665908,0.0001059814,0.0001112339,0.00007415511,0.0003462127],"category_scores_gemma":[0.0001500123,0.0001042105,0.00006400717,0.0007544755,0.00008519451,0.00008283435,0.00006895494,0.0001747029,0.000007570224],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001099055,"about_ca_system_score_gemma":0.00007638289,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.3192616,"about_ca_topic_score_gemma":0.4920436,"domain_scores_codex":[0.9984798,0.0002063664,0.0002283741,0.0004562004,0.0002066769,0.0004225473],"domain_scores_gemma":[0.9988355,0.0007296426,0.00007015004,0.00006759643,0.00006226636,0.0002348325],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00005994249,0.0001685831,0.8981686,0.00004711773,0.0003701605,0.0003758027,0.0001255605,0.0003462656,0.002212342,0.0001716011,0.08108591,0.01686814],"study_design_scores_gemma":[0.000331248,0.0003937222,0.7877091,0.0001537417,0.0002278557,0.00008094907,0.0004034656,0.001365849,0.0001043877,0.0007747491,0.2077699,0.0006850273],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9941153,0.002790819,0.000003149265,0.00142125,0.0003586374,0.0001473609,0.0004297,0.0003765211,0.0003572883],"genre_scores_gemma":[0.9962907,0.000500699,0.000001403943,0.001286172,0.0001826481,0.00002929941,0.001179218,0.000004841249,0.0005249588],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1727819,"threshold_uncertainty_score":0.6852714,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005112594398040225,"score_gpt":0.196507293744859,"score_spread":0.1913946993468188,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}