{"id":"W4391450725","doi":"10.3390/biology13020090","title":"The Omicron XBB.1 Variant and Its Descendants: Genomic Mutations, Rapid Dissemination and Notable Characteristics","year":2024,"lang":"en","type":"article","venue":"Biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"NextGenerationEU; European Commission","keywords":"Biology; Spike (software development); Virus; Glycoprotein; Viral replication; Replication (statistics); Pandemic; Sequence (biology); Computational biology; Genome; Genetics; Mutation; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Gene; Coronavirus disease 2019 (COVID-19); Virology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008445231,0.0002015002,0.0001796432,0.0002510599,0.0002209286,0.0003731014,0.0001420498,0.0002330158,0.001171512],"category_scores_gemma":[0.0002348257,0.00007930159,0.0001714077,0.0003652289,0.0001577801,0.0001369087,0.000166153,0.0003470874,0.0003139189],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001577854,"about_ca_system_score_gemma":0.0001135746,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001921924,"about_ca_topic_score_gemma":0.001491427,"domain_scores_codex":[0.9999245,0.000009267118,0.000006642393,0.00002312505,0.00001850531,0.00001794433],"domain_scores_gemma":[0.9998916,0.00001110487,0.00004592253,0.00001074824,0.00001576876,0.00002489057],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0009200464,0.0001540457,0.1395002,0.0001113977,0.00006824495,0.00470121,0.0005633074,0.0005349783,0.826265,0.0016356,0.0008140078,0.02473194],"study_design_scores_gemma":[0.00006507165,0.00139519,0.7847666,0.00006451509,0.0001051266,0.03518878,0.001074066,0.004005638,0.1406905,0.00113049,0.03143753,0.00007655703],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9974877,0.0007028137,0.0004441305,0.00007348624,0.00001603264,0.000007958212,0.0003256704,0.000006670244,0.000935546],"genre_scores_gemma":[0.9959604,0.0003545718,0.001049408,0.00006622502,0.00001611071,0.000008964376,0.0009197862,0.00001341634,0.001610966],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001921924,"threshold_uncertainty_score":0.003919065,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02461591793660177,"score_gpt":0.3430209079422978,"score_spread":0.3184049900056961,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}