{"id":"W4391479332","doi":"10.17504/protocols.io.4r3l28e1xl1y/v4","title":"Transformation of Diplonema papillatum by electroporation v2","year":2024,"lang":"en","type":"preprint","venue":"","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Transformation (genetics); Electroporation; Computer science; Biology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002383345,0.0001669838,0.0001752222,0.00005957977,0.00001831212,0.00002652003,0.0001196677,0.0004066003,0.00007772787],"category_scores_gemma":[0.00003159525,0.000157639,0.0001210633,0.00007149237,0.00003156646,0.000001926009,0.0001412937,0.0002275902,0.00000906037],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002503483,"about_ca_system_score_gemma":0.0001090513,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000418325,"about_ca_topic_score_gemma":0.00001067395,"domain_scores_codex":[0.9990562,0.00008554572,0.0003426889,0.0002974095,0.0001043622,0.0001137967],"domain_scores_gemma":[0.9994212,0.000004700026,0.0001411655,0.0002829801,0.0001216379,0.00002832677],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002730236,0.00002059371,0.000003252105,0.0002301056,0.00005993402,9.392729e-8,0.00005352716,0.00006933713,0.9611483,0.001036721,0.0359429,0.001407948],"study_design_scores_gemma":[0.00008862431,0.00008531608,0.000009087285,0.00001959511,0.00002951889,0.000001848948,0.00002195304,0.0001839276,0.9675985,0.002366418,0.02943716,0.000158057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7735713,0.002130236,0.1948458,0.0009635254,0.000446972,0.0007815921,0.0001953324,0.00006711362,0.02699819],"genre_scores_gemma":[0.9853878,0.0004870654,0.006134754,0.00009973557,0.0001653014,0.00002747501,0.003936145,0.00003748461,0.003724262],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2118165,"threshold_uncertainty_score":0.6428332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01073249717406636,"score_gpt":0.2967929455350291,"score_spread":0.2860604483609627,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}