{"id":"W4391539951","doi":"10.1038/s41564-023-01564-y","title":"The gut virome is associated with stress-induced changes in behaviour and immune responses in mice","year":2024,"lang":"en","type":"article","venue":"Nature Microbiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Science Foundation Ireland; European Commission; Wellcome Trust","keywords":"Human virome; Microbiome; Biology; Metagenomics; Immune system; Gut flora; Immunology; Bacteriophage; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002351174,0.0006600926,0.0003713516,0.0009403403,0.0002857039,0.0005238211,0.000247318,0.0006980421,0.001653726],"category_scores_gemma":[0.0002272697,0.0003489366,0.000612988,0.0003192024,0.0007297307,0.0003622225,0.0005174942,0.001600187,0.0003006826],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004714886,"about_ca_system_score_gemma":0.0003016764,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006860943,"about_ca_topic_score_gemma":0.001349021,"domain_scores_codex":[0.9996272,0.00004986454,0.00002311301,0.0001242086,0.00007209896,0.0001035059],"domain_scores_gemma":[0.9995614,0.0000281523,0.0001814974,0.0000400268,0.00002616197,0.0001627868],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006459687,0.0001068278,0.001019054,0.00003595477,0.00001338276,0.00005930693,0.00006163223,0.00006136292,0.9962961,0.00007804341,0.00005273711,0.001569598],"study_design_scores_gemma":[0.0001278248,0.006126262,0.1129827,0.0000890517,0.0001250195,0.0008502646,0.0005059748,0.002470458,0.8722177,0.0006295911,0.003813799,0.00006149835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9942963,0.0008260679,0.00257371,0.0002290398,0.00006167675,0.00004855545,0.0009392302,0.000162476,0.0008629919],"genre_scores_gemma":[0.9886036,0.001087057,0.004002441,0.0002900377,0.00002701109,0.0002346443,0.001014763,0.0001110822,0.004629353],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001653726,"threshold_uncertainty_score":0.005532265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005792497481876844,"score_gpt":0.2637505295626986,"score_spread":0.2579580320808217,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}