{"id":"W4391602650","doi":"10.1186/s40168-023-01735-3","title":"Divergent maturational patterns of the infant bacterial and fungal gut microbiome in the first year of life are associated with inter-kingdom community dynamics and infant nutrition","year":2024,"lang":"en","type":"article","venue":"Microbiome","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"ca_institutions":"Research Manitoba; McMaster University; University of Alberta; University of Manitoba; Children's Hospital Research Institute of Manitoba; University of British Columbia; Public Health Ontario; Hospital for Sick Children; BC Children's Hospital; Université de Sherbrooke; University of Toronto; Alberta Children's Hospital; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Microbiome; Biology; Microbial ecology; Ecology; Medical microbiology; Gut microbiome; Ecological succession; Ecosystem; Microbial population biology; Zoology; Bacteria; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003176435,0.000234189,0.0002058656,0.0005383575,0.0002990986,0.0003795073,0.0002472051,0.0003522804,0.006860795],"category_scores_gemma":[0.001787485,0.0001179439,0.0003395506,0.0004344797,0.0001297906,0.0003017739,0.0005065355,0.0004206668,0.0005602089],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003544967,"about_ca_system_score_gemma":0.0003608818,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01479996,"about_ca_topic_score_gemma":0.01744429,"domain_scores_codex":[0.99985,0.00002381722,0.000007886997,0.00003487388,0.0000366227,0.00004677758],"domain_scores_gemma":[0.99946,0.0001097091,0.0002059781,0.00002655584,0.00009870681,0.00009898895],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001058954,0.00004709532,0.8860356,0.0003486863,0.00009809033,0.00100026,0.0009206504,0.0002532823,0.02057181,0.0003792263,0.01068075,0.07860557],"study_design_scores_gemma":[0.00000279697,0.00005672659,0.9970462,0.00005607362,0.00001364477,0.0005690804,0.0002289597,0.0001478413,0.0006123577,0.00006555127,0.00119387,0.000007018718],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9746207,0.002128614,0.001923497,0.000399517,0.00005902944,0.00005294015,0.01677705,0.00009365006,0.00394501],"genre_scores_gemma":[0.9827885,0.002246931,0.003697613,0.00013785,0.00004082682,0.0001161892,0.008707715,0.00004259353,0.00222172],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01479996,"threshold_uncertainty_score":0.02942759,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008860913666568434,"score_gpt":0.2213969747918344,"score_spread":0.212536061125266,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}