{"id":"W4391606134","doi":"10.1038/s41597-024-03011-x","title":"Chromosome level genome assembly of the Etruscan shrew Suncus etruscus","year":2024,"lang":"en","type":"article","venue":"Scientific Data","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences; Rockefeller University; National Science Foundation; National Institutes of Health; U.S. Department of Health and Human Services; Howard Hughes Medical Institute","keywords":"Biology; Genome; Sequence assembly; Genetics; Genomics; Gene; Chromosome; Reference genome; Genome project; Computational biology; Transcriptome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005870564,0.0001284685,0.0001206665,0.00004752995,0.0001785447,0.0001428258,0.001466566,0.00006432138,0.00003472144],"category_scores_gemma":[0.00008618397,0.00008862238,0.00008093174,0.000317571,0.0003265752,0.000002553711,0.001778424,0.00007412444,0.00003259042],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001048395,"about_ca_system_score_gemma":0.000221918,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003275411,"about_ca_topic_score_gemma":0.0001937211,"domain_scores_codex":[0.9986064,0.00003655861,0.0002058955,0.0006900316,0.0002226793,0.0002384744],"domain_scores_gemma":[0.99782,0.00001363919,0.00004972997,0.002001924,0.00006473184,0.00004993568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000003380677,0.00001928615,0.0001917761,0.00003693709,0.00007499555,0.0000012998,0.00006483452,0.000009778535,0.9782449,0.0002412247,0.01873719,0.002374417],"study_design_scores_gemma":[0.0001542357,0.00005868487,0.0207338,0.0000334195,0.00006005924,0.00001475095,0.00008465885,0.0002051026,0.2428479,0.0003105583,0.7352613,0.0002355946],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9772348,0.008973386,0.0001167679,0.0003475105,0.003146788,0.0001931879,0.008250528,0.000006693215,0.001730358],"genre_scores_gemma":[0.9936913,0.0001242373,0.0003229656,0.00004469609,0.0001658884,0.000005173146,0.0007719052,0.000017602,0.004856274],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.735397,"threshold_uncertainty_score":0.3613916,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05750344690567299,"score_gpt":0.2823823370902275,"score_spread":0.2248788901845545,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}