{"id":"W4391647971","doi":"10.1002/ece3.10934","title":"Evaluating genotyping‐in‐thousands by sequencing as a genetic monitoring tool for a climate sentinel mammal using non‐invasive and archival samples","year":2024,"lang":"en","type":"article","venue":"Ecology and Evolution","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"Parks Canada; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Parks Canada","keywords":"Genotyping; Biology; Amplicon; Population; Genotype; Computational biology; Genetics; Polymerase chain reaction; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004293482,0.0004698448,0.0004133864,0.000575489,0.0004768239,0.0006360069,0.0005626423,0.0005784646,0.0009118988],"category_scores_gemma":[0.002634134,0.0003059242,0.0005036218,0.000445384,0.0005044946,0.0003291072,0.00056349,0.0004822456,0.0004049242],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003843032,"about_ca_system_score_gemma":0.0006129316,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007182725,"about_ca_topic_score_gemma":0.02622442,"domain_scores_codex":[0.9977623,0.0006881605,0.000116666,0.0005634408,0.0007243398,0.0001449652],"domain_scores_gemma":[0.9980778,0.0004664119,0.0004211913,0.0002479274,0.0006382073,0.0001484558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006953428,0.0002789789,0.4003707,0.0002114587,0.0005607856,0.0001827278,0.0009191447,0.008398642,0.5275902,0.0004505164,0.001302944,0.05903868],"study_design_scores_gemma":[0.00006999156,0.001915408,0.4949585,0.00008293587,0.0007576948,0.0007530061,0.001003666,0.0761619,0.4119806,0.0006313769,0.01155838,0.0001266344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9572805,0.0002112555,0.03899843,0.00009004746,0.00003425955,0.0002385156,0.001404074,0.0003059933,0.001437008],"genre_scores_gemma":[0.844879,0.0001526616,0.1502309,0.000341738,0.00001963618,0.0003064257,0.002440296,0.00007642386,0.001552878],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007182725,"threshold_uncertainty_score":0.02270639,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03029444380244489,"score_gpt":0.3029551568344851,"score_spread":0.2726607130320402,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}