{"id":"W4392004351","doi":"10.1128/aem.02155-23","title":"The catabolism of lignin-derived <i>p</i> -methoxylated aromatic compounds by <i>Rhodococcus jostii</i> RHA1","year":2024,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Lignin and Wood Chemistry","field":"Engineering","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Office of Energy Efficiency; Office of Sustainable Transportation; Bioenergy Technologies Office; Natural Sciences and Engineering Research Council of Canada; Biological and Environmental Research; U.S. Department of Energy; Office of Energy Efficiency and Renewable Energy; Center for Bioenergy Innovation; Office of Science","keywords":"Lignin; Catabolism; Rhodococcus; Rhodococcus rhodochrous; Chemistry; Organic chemistry; Microbiology; Stereochemistry; Biochemistry; Biology; Metabolism; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001436648,0.0004795095,0.000302898,0.0001597927,0.0001139765,0.0004301268,0.0002693792,0.0001948492,0.0003488376],"category_scores_gemma":[0.0001569288,0.0001274781,0.0003372445,0.0001609899,0.0001315852,0.0001942641,0.0002810058,0.0005460219,0.0002913606],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002957706,"about_ca_system_score_gemma":0.000259493,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002730283,"about_ca_topic_score_gemma":0.001916006,"domain_scores_codex":[0.9997843,0.00003167186,0.00002424895,0.00005867044,0.00005030712,0.00005090148],"domain_scores_gemma":[0.9998672,0.00002063567,0.00003799097,0.00002373249,0.00001955755,0.00003086265],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002560059,0.00002103662,0.0002688976,0.00001202086,0.000002947514,0.00002877446,0.00000601318,0.00004968767,0.9990164,0.00001554929,0.00001067871,0.000542385],"study_design_scores_gemma":[0.00000391262,0.0001315014,0.004402735,0.000003461005,0.00001208348,0.0001881334,0.0000435367,0.001881365,0.9928429,0.00001539944,0.0004699053,0.000005065297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965115,0.0003512611,0.001909086,0.00007143403,0.00001201132,0.00002214973,0.0003388444,0.00009382853,0.0006898911],"genre_scores_gemma":[0.9952004,0.0001701628,0.002902794,0.00002835609,0.000003751411,0.00001372869,0.0005743669,0.00003669082,0.001069789],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002730283,"threshold_uncertainty_score":0.005428851,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.001849600084724503,"score_gpt":0.1534328851811452,"score_spread":0.1515832850964207,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}