{"id":"W4392242950","doi":"10.1136/jcp-2023-209327","title":"Identification of immune cell markers associated with ulcerative colitis histological disease activity in colonic biopsies","year":2024,"lang":"en","type":"article","venue":"Journal of Clinical Pathology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University","funders":"","keywords":"CD20; Immune system; FOXP3; CD8; Ulcerative colitis; Medicine; Immunology; Biology; Internal medicine; Pathology; Antigen; Disease","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005406025,0.000284445,0.0002862872,0.001454322,0.0001550811,0.0004680904,0.0001335309,0.0002601485,0.0008998386],"category_scores_gemma":[0.001245294,0.0001541165,0.0001671978,0.0006266133,0.000220415,0.0001801084,0.0002741571,0.000201825,0.0002087997],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001180871,"about_ca_system_score_gemma":0.00006918553,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003552294,"about_ca_topic_score_gemma":0.0005962805,"domain_scores_codex":[0.9997249,0.00006749789,0.00004074091,0.00006515944,0.00006962185,0.00003207745],"domain_scores_gemma":[0.9990151,0.0002206038,0.0004807181,0.0000425596,0.0001351181,0.0001057927],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005026101,0.00001894287,0.9754822,0.00006134535,0.00007030114,0.0001769139,0.00005009933,0.00009962368,0.01756635,0.00001235808,0.00003578834,0.005923452],"study_design_scores_gemma":[0.000009211107,0.0002806655,0.9936913,0.00001544093,0.00005311936,0.001256731,0.00007676819,0.0003716442,0.00397466,0.00001843301,0.0002483715,0.000003518317],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980512,0.001145095,0.000346768,0.000009467013,0.000002616329,0.000007087356,0.00008486034,0.000009064986,0.0003438836],"genre_scores_gemma":[0.9988676,0.000231315,0.0006134232,0.000008870289,0.000006631677,0.000006962775,0.0001291287,0.000002397233,0.0001336287],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001454322,"threshold_uncertainty_score":0.003010273,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01768122677446302,"score_gpt":0.3206929676274445,"score_spread":0.3030117408529815,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}