{"id":"W4392283315","doi":"10.1155/2024/2327939","title":"Descriptive Epidemiology and Phylodynamics of the “First Wave” of an Outbreak of Highly Pathogenic Avian Influenza (H5N1 Clade 2.3.4.4b) in British Columbia and the Yukon, Canada, April to September 2022","year":2024,"lang":"en","type":"article","venue":"Transboundary and Emerging Diseases","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Yukon Department of Environment; Environment and Climate Change Canada; Canadian Food Inspection Agency; Public Health Agency of Canada; Ministry of Agriculture; Government of British Columbia; BC Centre for Disease Control; University of British Columbia","funders":"","keywords":"Influenza A virus subtype H5N1; Clade; Viral phylodynamics; Outbreak; Highly pathogenic; Epidemiology; Virology; Geography; Biology; Phylogenetics; Virus; Genetics; Medicine; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002609964,0.0002940028,0.0002585797,0.00255862,0.001285893,0.000884597,0.0006686043,0.0004182224,0.0009187387],"category_scores_gemma":[0.0009246965,0.0002740729,0.0002627556,0.00314526,0.0007984297,0.0002632489,0.000636186,0.0003946497,0.0001692188],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.005023495,"about_ca_system_score_gemma":0.004105525,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.8440056,"about_ca_topic_score_gemma":0.9052856,"domain_scores_codex":[0.9995244,0.0000372966,0.00003098564,0.0001054439,0.0001039931,0.0001979486],"domain_scores_gemma":[0.9983176,0.0001086799,0.0005068736,0.00006426888,0.0006190261,0.0003835382],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00006403901,0.000014192,0.9972622,0.000009112701,0.00002182261,0.0000745719,0.0002515599,0.0001200249,0.0005256269,0.00001728908,0.0002586637,0.001380818],"study_design_scores_gemma":[6.52244e-7,0.000009839498,0.9993616,0.000002607886,0.000003187835,0.00004098301,0.0003982594,0.00007396498,0.00001617641,0.000003165413,0.00008750425,0.00000205021],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9973887,0.0001245354,0.00005726657,0.00003804734,0.000001726117,0.00002072181,0.001666912,0.000006295566,0.000695752],"genre_scores_gemma":[0.9974272,0.0001768168,0.0001109144,0.00002414022,0.000002709574,0.00001544317,0.001983549,0.000002250244,0.000256908],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1559944,"threshold_uncertainty_score":0.3138261,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02480605621131824,"score_gpt":0.2909692389441232,"score_spread":0.2661631827328049,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}