{"id":"W4392450437","doi":"10.1038/s41525-024-00395-y","title":"Genome-wide association analyses of ovarian cancer patients undergoing primary debulking surgery identify candidate genes for residual disease","year":2024,"lang":"en","type":"article","venue":"npj Genomic Medicine","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre; University of British Columbia; University Health Network","funders":"Medical Research and Materiel Command; National Cancer Institute; Instituto de Salud Carlos III; Canadian Institutes of Health Research; Cancer Institute NSW; Ovarian Cancer Research Fund; Cancer Australia; National Institute for Health and Care Research; National Health and Medical Research Council; Norges Forskningsråd; Moffitt Cancer Center; Minnesota Ovarian Cancer Alliance; Wellcome Trust; Cancer Research UK; National Center for Research Resources; BC Cancer Foundation; Fred C. and Katherine B. Andersen Foundation; Helse Vest; Ovarian Cancer Australia; National Center for Advancing Translational Sciences; Medical Research Council; Cancer Research Society; Mayo Foundation for Medical Education and Research; Ministerio de Economía y Competitividad; University of Pittsburgh; National Institutes of Health; European Commission; U.S. Department of Defense","keywords":"Debulking; Ovarian cancer; Disease; Medicine; Genome-wide association study; Oncology; Gene; Candidate gene; Genetic association; Internal medicine; Biology; Bioinformatics; Cancer; Genetics; Genotype; Single-nucleotide polymorphism","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003686283,0.0001911641,0.0002836353,0.0004792426,0.0002338326,0.0003593005,0.0002165438,0.0002671278,0.001647096],"category_scores_gemma":[0.001408726,0.0001255422,0.0005117813,0.0007964839,0.000250709,0.00009110023,0.0003013041,0.0003303687,0.0001193031],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001201349,"about_ca_system_score_gemma":0.0001491453,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003599659,"about_ca_topic_score_gemma":0.005740876,"domain_scores_codex":[0.9996573,0.0001062124,0.00002908968,0.0001024681,0.00004648997,0.00005844967],"domain_scores_gemma":[0.9992612,0.0002705271,0.0002515311,0.00009011554,0.00003877803,0.00008774406],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0005836529,0.00001886561,0.9904199,0.00002196532,0.0004405937,0.0002060719,0.00004995274,0.0001321073,0.004838855,0.00003885162,0.0001607601,0.003088382],"study_design_scores_gemma":[0.00001212663,0.00005465075,0.9988248,0.000002721536,0.0001140257,0.0002190707,0.00002749478,0.000228304,0.000301818,0.00003128318,0.0001818063,0.00000189153],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988227,0.0003900352,0.0001750803,0.00003724149,0.00000631657,0.000002498592,0.0003240731,0.000007076761,0.0002349503],"genre_scores_gemma":[0.9995962,0.00004835372,0.00006766133,0.000009576323,0.000004158589,0.000001524497,0.000199313,0.000001655369,0.00007164435],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003599659,"threshold_uncertainty_score":0.007157445,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04311196093886641,"score_gpt":0.339936937273058,"score_spread":0.2968249763341916,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}