{"id":"W4392461351","doi":"10.3390/pathogens13030225","title":"Modulation of Porcine Gut Microbiota and Microbiome: Hologenomic, Dietary, and Endogenous Factors","year":2024,"lang":"en","type":"editorial","venue":"Pathogens","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Agriculture and Agri-Food Canada; National Institute of Food and Agriculture; North Carolina Agricultural Foundation; Natural Sciences and Engineering Research Council of Canada; Swine Innovation Porc; U.S. Department of Agriculture","keywords":"Microbiome; Endogeny; Intestinal Microbiome; Gut microbiome; Biology; Gut flora; Production (economics); Food science; Bioinformatics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001982452,0.0004358462,0.0005342463,0.0001630243,0.00009230067,0.00003623943,0.0001633726,0.001032285,0.00001111971],"category_scores_gemma":[0.00006979312,0.0004072532,0.0001378937,0.00008431982,0.0001860896,0.000002822792,0.0003114516,0.0003096656,0.000006606601],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003436414,"about_ca_system_score_gemma":0.0002056816,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001262726,"about_ca_topic_score_gemma":0.00007863538,"domain_scores_codex":[0.9981948,0.00006708837,0.0004470134,0.0008181841,0.0001042749,0.0003686222],"domain_scores_gemma":[0.9990585,0.0000416411,0.0002251501,0.0004202694,0.0001296328,0.0001247981],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00004215047,0.00003332197,0.0003342724,0.0005321766,0.0001227137,0.00001075271,0.0001698193,8.928303e-7,0.8544388,0.000001625015,0.1440135,0.0002999798],"study_design_scores_gemma":[0.00100103,0.0008824537,0.008346629,0.0001943357,0.0004553221,0.0001526245,0.000090442,0.000007088208,0.09273984,0.0000389341,0.895133,0.0009583309],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.838243,0.0184167,0.00001395405,0.00004583864,0.1366301,0.000438268,0.006091091,0.00002056791,0.0001004299],"genre_scores_gemma":[0.8190189,0.01217149,0.0007294121,0.00005397397,0.1531466,0.00001339633,0.01341245,0.000192685,0.001261161],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7616989,"threshold_uncertainty_score":0.9998379,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01512567202222379,"score_gpt":0.2501127122383698,"score_spread":0.2349870402161461,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}