{"id":"W4392520103","doi":"10.1093/plphys/kiae135","title":"ARGONAUTE1-binding Tudor domain proteins function in small interfering RNA production for RNA-directed DNA methylation","year":2024,"lang":"en","type":"article","venue":"PLANT PHYSIOLOGY","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Precursory Research for Embryonic Science and Technology; National Institute for Basic Biology; Core Research for Evolutional Science and Technology; Japan Science and Technology Agency; Japan Society for the Promotion of Science; Centre National de la Recherche Scientifique; Institute of Genetics; Shimane University; Human Frontier Science Program","keywords":"Biology; Subfamily; Argonaute; Eukaryote; RNA-Directed DNA Methylation; Genetics; Mutant; DNA methylation; Arabidopsis; RNA; Cell biology; Methylation; Small interfering RNA; DNA; Gene; Genome; Gene expression","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004816499,0.0001528208,0.0002072605,0.00008038093,0.0001167062,0.00003656901,0.0001508977,0.0001724287,0.00003588156],"category_scores_gemma":[0.0001344069,0.00006966582,0.00007269852,0.0003673943,0.00004567779,0.00009328505,0.00006571579,0.0002361983,0.00003556891],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000652665,"about_ca_system_score_gemma":0.00001539379,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000759368,"about_ca_topic_score_gemma":0.0008255153,"domain_scores_codex":[0.9985593,0.000215498,0.0002265656,0.0005420443,0.00007075452,0.0003858659],"domain_scores_gemma":[0.9995331,0.0002821142,0.00005171627,0.0000528284,0.00003725562,0.00004305109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003558636,0.00004004957,0.0001209779,0.00004320751,0.00003359947,0.000007056484,0.00005125564,0.00001766635,0.9849398,0.0002632573,0.0001571163,0.01397017],"study_design_scores_gemma":[0.0004244435,0.001527872,0.1318939,0.0003281201,0.00003463603,0.00007986797,0.000215419,0.004215523,0.8402778,0.01043912,0.009958994,0.0006043628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9972336,0.0001514218,0.0001070575,0.0007368297,0.0005571687,0.0008078836,0.0001324139,0.0002031417,0.00007050742],"genre_scores_gemma":[0.9975292,0.00003380812,0.000246939,0.00002934154,0.0004165541,0.0002846618,0.001325253,0.000002548017,0.0001316618],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.144662,"threshold_uncertainty_score":0.2840889,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03346890053014501,"score_gpt":0.2465247095039547,"score_spread":0.2130558089738097,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}