{"id":"W4392642708","doi":"10.1101/2024.03.08.24304006","title":"Dynamics of T cell responses to COVID-19 vaccines and breakthrough infection in people living with HIV receiving antiretroviral therapy","year":2024,"lang":"en","type":"preprint","venue":"medRxiv","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Providence Health Care; AIDS Vancouver; McGill University Health Centre; Simon Fraser University","funders":"Canadian Institutes of Health Research; African Academy of Sciences; Michael Smith Health Research BC; Menzies School of Health Research; Simon Fraser University; Providence Health Care; Public Health Agency; Public Health Agency of Canada","keywords":"Medicine; Seroconversion; Vaccination; Immunology; CD8; Immune system; Antiretroviral therapy; HIV vaccine; T cell; Virology; Human immunodeficiency virus (HIV); Antibody; Antigen; Vaccine trial; Internal medicine; Viral load","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001730169,0.0001297121,0.0001810013,0.0003341444,0.0002882135,0.0003365687,0.0001358762,0.0003068516,0.001137823],"category_scores_gemma":[0.0008201485,0.000108359,0.0001518403,0.0003046612,0.0001219909,0.0002262671,0.0001981443,0.0002815773,0.0001081145],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001608132,"about_ca_system_score_gemma":0.0001015571,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002693348,"about_ca_topic_score_gemma":0.002265053,"domain_scores_codex":[0.9998852,0.00002382189,0.000008143172,0.00002754153,0.00002137677,0.00003394824],"domain_scores_gemma":[0.9997306,0.00006095386,0.00009837196,0.00001500529,0.00003604755,0.00005902051],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002944807,0.0000561157,0.9952542,0.000009969938,0.00002549288,0.00007357294,0.0001466305,0.00005341816,0.001108845,0.00001419784,0.00006931315,0.002893821],"study_design_scores_gemma":[0.000007918012,0.0003285343,0.9985009,0.000005522294,0.00001524609,0.00018086,0.0003069448,0.0002620818,0.0002490864,0.00002565548,0.0001151613,0.000002159931],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9996592,0.00007602843,0.00002525553,0.00001141958,0.000001440403,0.000003391961,0.00007936921,0.000001516027,0.0001424584],"genre_scores_gemma":[0.9997839,0.0000259447,0.00002256745,0.000008243976,0.000002998574,0.000003770709,0.00006009229,2.729404e-7,0.0000921159],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002693348,"threshold_uncertainty_score":0.005355358,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02943932862235953,"score_gpt":0.3415614782519829,"score_spread":0.3121221496296234,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}