{"id":"W4393093750","doi":"10.1158/1538-7445.am2024-1249","title":"Abstract 1249: cBioPortal for Cancer Genomics","year":2024,"lang":"en","type":"article","venue":"Cancer Research","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Princess Margaret Cancer Centre","funders":"","keywords":"Cancer; Genomics; Medicine; Biology; Computational biology; Genetics; Genome; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002633874,0.002110125,0.002780143,0.008238053,0.001269554,0.004696616,0.005621612,0.002261111,0.1113746],"category_scores_gemma":[0.008876991,0.001419776,0.001868958,0.01156658,0.0004428434,0.00285286,0.005117156,0.003512518,0.1296932],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001698923,"about_ca_system_score_gemma":0.003516334,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007770066,"about_ca_topic_score_gemma":0.008722411,"domain_scores_codex":[0.998087,0.000358895,0.0002191378,0.0004372526,0.0006301993,0.0002674636],"domain_scores_gemma":[0.9966665,0.0008333302,0.0002560165,0.001021306,0.000705301,0.0005176165],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001453984,0.00001404179,0.0004786662,0.001292809,0.0000985536,0.00007959519,0.00007136827,0.0006668105,0.001198772,0.003892527,0.9778649,0.01419666],"study_design_scores_gemma":[0.0002499342,0.00002149311,0.001655479,0.0003980312,0.0001099378,0.000238975,0.00004238176,0.002844384,0.002061703,0.01442959,0.9778761,0.00007204596],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"dataset","genre_gemma":"software","genre_scores_codex":[0.0007756935,0.002400122,0.01790842,0.001010894,0.0003906592,0.0001924909,0.8774621,0.08640301,0.01345651],"genre_scores_gemma":[0.003194755,0.0008317255,0.01294169,0.0005033468,0.00008444435,0.00046206,0.9667072,0.01258681,0.002687858],"genre_candidate":"software","genre_consensus":null,"teacher_disagreement_score":0.1113746,"threshold_uncertainty_score":0.3725852,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09450901345165652,"score_gpt":0.4506848571436513,"score_spread":0.3561758436919948,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}