{"id":"W4393097360","doi":"10.1371/journal.pgen.1011192","title":"Canadian COVID-19 host genetics cohort replicates known severity associations","year":2024,"lang":"en","type":"review","venue":"PLoS Genetics","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; Canada's Michael Smith Genome Sciences Centre; Jewish General Hospital; McGill University; University of Ottawa; Simon Fraser University; BC Cancer Agency; University of Toronto; BC Children's Hospital; Public Health Ontario; University of British Columbia; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Michael Smith Health Research BC","keywords":"Biology; Genetics; Locus (genetics); Genome-wide association study; Population stratification; Population; Gene; Single-nucleotide polymorphism; Medicine; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006417325,0.0007080598,0.001942434,0.0007828061,0.0003039439,0.0002042279,0.0006954998,0.001022363,0.00008053497],"category_scores_gemma":[0.001223556,0.0006326945,0.0006819264,0.001298668,0.0001673861,0.00002128117,0.0003347074,0.001391099,0.001795683],"about_ca_system_candidate":true,"about_ca_system_consensus":true,"about_ca_system_score_codex":0.004146406,"about_ca_system_score_gemma":0.01784402,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.00799664,"about_ca_topic_score_gemma":0.03209825,"domain_scores_codex":[0.9955037,0.0002185203,0.0009708233,0.001160531,0.001004539,0.001141868],"domain_scores_gemma":[0.9965853,0.000367741,0.0002386287,0.001657466,0.0003845805,0.0007662898],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0000408079,0.001556732,0.0936259,0.1886352,0.01662807,0.003428478,0.001214186,0.000001746073,0.0003131781,0.0004126575,0.2531633,0.4409798],"study_design_scores_gemma":[0.0001854337,0.0001087048,0.0001162848,0.0016313,0.00572295,0.0001111615,0.00001318788,0.0001659069,0.0001907842,0.00009680836,0.991079,0.0005784414],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0004609103,0.9888833,0.000007321493,0.0006883772,0.000348354,0.002801903,0.00167134,0.000211901,0.004926578],"genre_scores_gemma":[0.0000618424,0.9782735,0.0002245478,0.01852504,0.0009390408,0.0005071039,0.0004791768,0.0002451961,0.0007446272],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.7379157,"threshold_uncertainty_score":0.9996765,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1207953523385,"score_gpt":0.414769925450249,"score_spread":0.293974573111749,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}