{"id":"W4393164108","doi":"10.3390/pathogens13040276","title":"Staphylococcus aureus Infections and Human Intestinal Microbiota","year":2024,"lang":"en","type":"review","venue":"Pathogens","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Staphylococcus aureus; Microbiome; Sepsis; Immunology; Staphylococcal infections; Medicine; Microbiology; Biology; Intensive care medicine; Bioinformatics; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002364615,0.0007723903,0.002003992,0.0006067582,0.0002200133,0.0001223931,0.0001854725,0.0004991679,0.0001638198],"category_scores_gemma":[0.0001785794,0.0006124653,0.0008151481,0.000677424,0.0003325615,0.00003897794,0.0002762753,0.001232268,0.0005388941],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002889135,"about_ca_system_score_gemma":0.000484893,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003572707,"about_ca_topic_score_gemma":0.00004731003,"domain_scores_codex":[0.9974032,0.0001031426,0.0008137965,0.0009237801,0.0002024534,0.0005536447],"domain_scores_gemma":[0.998448,0.0001350147,0.000254864,0.0007266039,0.0001373062,0.0002982021],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00002673563,0.0007327946,0.0005515089,0.1678739,0.00199199,0.003478914,0.0002248671,1.662438e-7,0.01660492,0.004035356,0.05931018,0.7451687],"study_design_scores_gemma":[0.0001752303,0.0002070576,0.00005897311,0.02667048,0.00546463,0.0007545688,0.00001465312,5.119409e-7,0.00001257588,0.00006730694,0.9660578,0.000516176],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002635185,0.9919709,0.00006126471,0.00004217895,0.000431844,0.001427179,0.0006078426,0.0002549551,0.004940314],"genre_scores_gemma":[0.0001953403,0.994116,0.0007100958,0.00007384336,0.0006109019,0.0001334286,0.0002859549,0.00019522,0.00367921],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9067476,"threshold_uncertainty_score":0.9996327,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04210604899596806,"score_gpt":0.3549296039180923,"score_spread":0.3128235549221242,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}