{"id":"W4393258334","doi":"10.1038/s41597-024-03142-1","title":"Genome assembly of a symbiotic balantidia (Balantidium ctenopharyngodoni) in fish hindgut","year":2024,"lang":"en","type":"article","venue":"Scientific Data","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"ca_institutions":"Structural Genomics Consortium","funders":"National Key Research and Development Program of China; Earmarked Fund for China Agriculture Research System; China Postdoctoral Science Foundation; National Natural Science Foundation of China","keywords":"Hindgut; Biology; Genome; Gene; Comparative genomics; Synteny; Genetics; Genomics; Evolutionary biology; Botany; Midgut","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007111664,0.0001419642,0.0001778877,0.0001264435,0.00006497873,0.0001362365,0.0009107285,0.00007704306,0.00002335048],"category_scores_gemma":[0.00007197319,0.0001324088,0.00005321786,0.00032909,0.0001783701,0.000004104189,0.0009817308,0.00007767166,0.00003580512],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00000976312,"about_ca_system_score_gemma":0.0001679197,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004123702,"about_ca_topic_score_gemma":0.0001982638,"domain_scores_codex":[0.9983978,0.00003837914,0.0002806756,0.0008184731,0.00016952,0.0002951771],"domain_scores_gemma":[0.9985538,0.00001818881,0.00004584151,0.001274895,0.00005011661,0.00005718169],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001003548,0.0000468343,0.001982076,0.00007752826,0.00005769689,0.00001311482,0.00006045786,0.00001312816,0.9823308,0.00006376838,0.01461202,0.0007325627],"study_design_scores_gemma":[0.0006679968,0.0001894513,0.1683132,0.0001575309,0.00009034756,0.0000443215,0.0001816845,0.001321403,0.274538,0.0001870227,0.5536665,0.000642621],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.98939,0.004330097,0.00004776632,0.0002152172,0.001324446,0.0001694631,0.003502274,0.000006771431,0.001013966],"genre_scores_gemma":[0.9951345,0.0003844521,0.0002722097,0.00003636137,0.0001072536,0.000004330565,0.002629473,0.00001872066,0.001412647],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7077928,"threshold_uncertainty_score":0.5399473,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02409368460001117,"score_gpt":0.2647571905508476,"score_spread":0.2406635059508365,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}