{"id":"W4393274435","doi":"10.3389/fgene.2024.1355134","title":"Effect of a probiotic and an antibiotic on the mobilome of the porcine microbiota","year":2024,"lang":"en","type":"article","venue":"Frontiers in Genetics","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Mitel (Canada); Université de Sherbrooke; Université de Montréal; Centre de Recherche en Sciences Animales de Deschambault","funders":"Natural Sciences and Engineering Research Council of Canada; Government of Canada; Université Laval","keywords":"Antibiotics; Antibiotic resistance; Microbiome; Biology; Microbiology; Probiotic; Pediococcus acidilactici; Resistome; Metagenomics; Feces; Bacteria; Biotechnology; Gene; Genetics; Integron","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004052547,0.0003639619,0.0005583056,0.0002577114,0.0002035451,0.0005371512,0.0001795418,0.0004549519,0.002305078],"category_scores_gemma":[0.0003811749,0.000184691,0.0003979002,0.0001630083,0.0003126704,0.000252837,0.0004196373,0.0005305014,0.0003086828],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001350412,"about_ca_system_score_gemma":0.0003120519,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004537983,"about_ca_topic_score_gemma":0.0005590966,"domain_scores_codex":[0.9996552,0.0001065756,0.00002555611,0.00007440746,0.00006696649,0.00007129709],"domain_scores_gemma":[0.999647,0.00008815721,0.00005299513,0.00002836393,0.00004010306,0.0001432862],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.004410896,0.0004558001,0.001133601,0.0001010059,0.00003094814,0.00004080781,0.00004333385,0.00007021494,0.9879012,0.00001338737,0.00004117587,0.00575775],"study_design_scores_gemma":[0.0004142604,0.05415931,0.09742321,0.0001389669,0.000319657,0.0003603397,0.0004463218,0.001878953,0.839503,0.00009184206,0.005226251,0.00003794907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978539,0.0008715802,0.0002451914,0.000124918,0.00005431231,0.0000219107,0.0001104463,0.000009245035,0.0007083566],"genre_scores_gemma":[0.9957507,0.0006653884,0.00150299,0.0002060203,0.00004148966,0.00004453187,0.000313718,0.00001365871,0.001461458],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002305078,"threshold_uncertainty_score":0.007711291,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00423515694376696,"score_gpt":0.2492953730749099,"score_spread":0.2450602161311429,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}