{"id":"W4393308873","doi":"10.3390/microorganisms12040695","title":"Genomic and Phenotypic Analysis of Salmonella enterica Bacteriophages Identifies Two Novel Phage Species","year":2024,"lang":"en","type":"article","venue":"Microorganisms","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; University of Guelph; Agriculture and Agri-Food Canada; University of British Columbia; McGill University","funders":"Genome Canada; Université Laval","keywords":"Salmonella enterica; Phenotype; Biology; Salmonella; Bacteriophage; Genetics; Computational biology; Microbiology; Gene; Bacteria; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001464305,0.0003135626,0.0002043921,0.0005953174,0.0001653687,0.0003087702,0.0001106098,0.0002844084,0.0003960806],"category_scores_gemma":[0.0003649924,0.0001401085,0.0003826839,0.0004242478,0.0002060754,0.0001761133,0.0003484838,0.0003115771,0.0001959972],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000114723,"about_ca_system_score_gemma":0.0001776233,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008422603,"about_ca_topic_score_gemma":0.00091555,"domain_scores_codex":[0.9998541,0.00001450672,0.00002213569,0.00004236208,0.00004061299,0.00002621694],"domain_scores_gemma":[0.9995964,0.00009606104,0.000109333,0.00003148809,0.00008128179,0.00008534358],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001735442,0.00005256321,0.02205189,0.00007448145,0.00001322258,0.00009365669,0.0001745401,0.00005200079,0.9724577,0.0000340235,0.00002193009,0.004800345],"study_design_scores_gemma":[0.00003098177,0.001150503,0.7904506,0.00004000974,0.00009689614,0.003094015,0.0008968062,0.00109075,0.2009262,0.0001221697,0.002074997,0.0000260875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9986197,0.0001118761,0.0007613492,0.00001281568,0.000002541358,0.0000122464,0.0002351325,0.000008671321,0.0002356825],"genre_scores_gemma":[0.9951762,0.0001394653,0.003134719,0.00002774394,0.000004137391,0.00002226617,0.00110316,0.000008140702,0.0003841053],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0008422603,"threshold_uncertainty_score":0.001674712,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009303743787218561,"score_gpt":0.2319796895505738,"score_spread":0.2226759457633552,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}