{"id":"W4393471098","doi":"10.21203/rs.3.rs-4182285/v1","title":"Latent tuberculosis infection is associated with an enrichment of short chain fatty acid producing bacteria in the stool of women living with HIV","year":2024,"lang":"en","type":"preprint","venue":"Research Square","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"European and Developing Countries Clinical Trials Partnership; National Institute of Allergy and Infectious Diseases; National Institutes of Health; Universiteit Stellenbosch; Medical Research Council; South African Medical Research Council; Deutscher Akademischer Austauschdienst; Harry Crossley Foundation; University of Cape Town; National Research Foundation","keywords":"Tuberculosis; Human immunodeficiency virus (HIV); Bacteria; Acid-fast; Microbiology; Latent tuberculosis; Medicine; Virology; Biology; Mycobacterium tuberculosis; Pathology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000200729,0.000174462,0.0001925041,0.0003388935,0.0002833075,0.0004934881,0.000132454,0.0003276777,0.005017694],"category_scores_gemma":[0.001548988,0.0002060868,0.0001997775,0.0004727943,0.0001706707,0.0002287233,0.0003071372,0.0003816492,0.0006125908],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001052454,"about_ca_system_score_gemma":0.0001633824,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002663843,"about_ca_topic_score_gemma":0.002457022,"domain_scores_codex":[0.9998552,0.00004011879,0.00001469841,0.00004495796,0.00001906205,0.00002601902],"domain_scores_gemma":[0.9995468,0.00013785,0.0001757001,0.00002510195,0.00005192641,0.00006253965],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001085302,0.00007115652,0.9758258,0.0003076429,0.0001033189,0.0008675706,0.0009069731,0.0000500315,0.007170347,0.00003750483,0.002588128,0.0109861],"study_design_scores_gemma":[0.00001443109,0.000180755,0.995078,0.0001448537,0.00005918614,0.001074487,0.0009672622,0.0001169506,0.0005518436,0.00005145855,0.00175288,0.000007878348],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953126,0.001517258,0.0001709025,0.0003293255,0.00006170483,0.00001401608,0.001717728,0.00001527918,0.000861121],"genre_scores_gemma":[0.9970436,0.0007533676,0.0002420461,0.0002185908,0.00004399277,0.00001537363,0.0008947835,0.00001086972,0.0007774533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005017694,"threshold_uncertainty_score":0.01678586,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05002061892744152,"score_gpt":0.3707788927482499,"score_spread":0.3207582738208084,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}