{"id":"W4393930851","doi":"10.3390/microorganisms12040687","title":"A Comprehensive Review on Shiga Toxin Subtypes and Their Niche-Related Distribution Characteristics in Shiga-Toxin-Producing E. coli and Other Bacterial Hosts","year":2024,"lang":"en","type":"review","venue":"Microorganisms","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta","funders":"National Natural Science Foundation of China","keywords":"Shiga toxin; Shigella dysenteriae; Biology; Virulence; STX2; Microbiology; Toxin; Shigella; Subtyping; Virulence factor; Escherichia coli; Host (biology); Gene; Ecology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004186037,0.000665263,0.001471923,0.0000793361,0.0001050265,0.0001128192,0.0002423475,0.0004554841,0.00002572941],"category_scores_gemma":[0.000291261,0.0005018188,0.0001721514,0.0003050114,0.0002204161,0.000005287291,0.0005934679,0.0005897821,0.00003477199],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009959791,"about_ca_system_score_gemma":0.0002144877,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002261063,"about_ca_topic_score_gemma":0.00002949308,"domain_scores_codex":[0.9973646,0.000366867,0.0006665196,0.00101863,0.0001313208,0.0004520212],"domain_scores_gemma":[0.9989743,0.00007377601,0.0002448102,0.0004977761,0.00009476156,0.000114609],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0002309058,0.000400805,0.0001728252,0.1684417,0.002210771,0.0001483254,0.0007372003,7.115662e-8,0.4968123,0.0001582604,0.01639352,0.3142933],"study_design_scores_gemma":[0.0002868414,0.0002555312,0.0002810423,0.02050607,0.0003110628,0.00006791334,0.00002364067,7.527496e-7,0.003184186,0.00001553966,0.9745209,0.0005465592],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05501619,0.9421755,0.000003057907,0.0001668069,0.0002768571,0.001272821,0.001033886,0.00002612945,0.00002873175],"genre_scores_gemma":[0.002512495,0.9950976,0.00002915051,0.0003387628,0.0002637437,0.0001086469,0.001288613,0.0001121025,0.0002489371],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9581273,"threshold_uncertainty_score":0.9997433,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.025669611788215,"score_gpt":0.3078094694225083,"score_spread":0.2821398576342933,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}