{"id":"W4393950665","doi":"10.1093/genetics/iyae050","title":"WormBase 2024: status and transitioning to Alliance infrastructure","year":2024,"lang":"en","type":"article","venue":"Genetics","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":275,"is_retracted":false,"has_abstract":true,"ca_institutions":"Ontario Institute for Cancer Research","funders":"U.S. National Library of Medicine; National Human Genome Research Institute; National Heart, Lung, and Blood Institute; Medical Research Council","keywords":"Alliance; Caenorhabditis elegans; Biology; Genome; State (computer science); Key (lock); Knowledge management; Genetics; Computational biology; Data science; Political science; Gene; Ecology; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["scholarly_communication"],"consensus_categories":[],"category_scores_codex":[0.03911729,0.002172849,0.002910447,0.008744504,0.002798476,0.01114915,0.0110381,0.004748268,0.03059991],"category_scores_gemma":[0.06715823,0.002018604,0.001647356,0.01098482,0.001730536,0.02445035,0.0173049,0.006577176,0.06521009],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002405565,"about_ca_system_score_gemma":0.01480547,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005895771,"about_ca_topic_score_gemma":0.002709164,"domain_scores_codex":[0.9911814,0.002077361,0.001308219,0.0012801,0.003117406,0.001035595],"domain_scores_gemma":[0.954546,0.005643924,0.00238011,0.008668732,0.0139667,0.01479439],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0007589675,0.0002171177,0.002560579,0.001101435,0.0001059266,0.0001710656,0.0003986435,0.0008240031,0.002865516,0.01548526,0.8610411,0.1144705],"study_design_scores_gemma":[0.0001323916,0.00009716737,0.0011939,0.0004582986,0.0000711479,0.0001373991,0.000130959,0.002081487,0.001490047,0.00732196,0.9867638,0.0001215521],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","genre_codex":"software","genre_gemma":"empirical","genre_scores_codex":[0.01920134,0.01462905,0.2163935,0.06457359,0.01075742,0.002938478,0.2864317,0.2991284,0.08594655],"genre_scores_gemma":[0.01252909,0.003958914,0.1758081,0.006190607,0.001070038,0.002549592,0.7568822,0.02590296,0.01510848],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.9888508,"threshold_uncertainty_score":0.2068745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005836938480321863,"score_gpt":0.235629752362105,"score_spread":0.2297928138817831,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}